Evidence map›Paper›PMID 20724438›Full record

ArticleNucleic acids research2011

Structure and function of the Rad9-binding region of the DNA-damage checkpoint adaptor TopBP1.

Mathieu Rappas, Antony W Oliver, Laurence H Pearl

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 78 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Mathieu RappasCancer Research UK DNA Repair Enzyme Group, Section of Structural Biology, The Institute of Cancer Research, London, UK.
Antony W Oliver
Laurence H Pearl
Cancer Research UK · GBInstitute of Cancer Research · GB

Funding

Cancer Research UK C302/A7803Cancer Research UK C302/A8265
6 · The paper itself

Abstract

TopBP1 is a scaffold protein that coordinates activation of the DNA-damage-checkpoint response by coupling binding of the 9-1-1 checkpoint clamp at sites of ssDNA, to activation of the ATR-ATRIP checkpoint kinase complex. We have now determined the crystal structure of the N-terminal region of human TopBP1, revealing an unexpected triple-BRCT domain structure. The arrangement of the BRCT domains differs significantly from previously described tandem BRCT domain structures, and presents two distinct sites for binding phosphopeptides in the second and third BRCT domains. We show that the site in the second but not third BRCT domain in the N-terminus of TopBP1, provides specific interaction with a phosphorylated motif at pSer387 in Rad9, which can be generated by CK2.

Indexed as

Binding SitesCarrier ProteinsCell Cycle ProteinsCrystallography, X-RayDNA-Binding ProteinsHumansModels, MolecularNuclear ProteinsPhosphopeptidesPhosphorylationProtein Interaction Domains and MotifsCarrier ProteinsCell Cycle ProteinsDNA-Binding ProteinsNuclear ProteinsPhosphopeptidesrad9 proteinTOPBP1 protein, human

Identifiers

PMID20724438
PMCPMC3017600
OpenAlexW2117890725

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.