ArticlePlant physiology2010
Analysis of the rice mitochondrial carrier family reveals anaerobic accumulation of a basic amino acid carrier involved in arginine metabolism during seed germination.
Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed, 63 citations in OpenAlex.
- Identification of candidate genes for deep-sowing tolerance in rice by genome-wide association study and transcriptome sequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- ROS-induced ATP synthase mRNA degradation and metabolism dysfunction reveals the mechanism of artificial deteriorated cotton seeds.PloS one · 2026Article
- The Physio-Biochemical Changes Induced by Gibberellic Acid Seed Priming in Rice Seeds against Submergence Stress: Consequences for Starch Degradation, Energy Metabolism and Hormonal Metabolism.Rice (New York, N.Y.) · 2025Article
- Arabidopsis Transcriptomics Reveals the Role of Lipoxygenase2 (AtLOX2) in Wound-Induced Responses.International journal of molecular sciences · 2024Article
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- GWAS Combined with WGCNA of Transcriptome and Metabolome to Excavate Key Candidate Genes for Rice Anaerobic Germination.Rice (New York, N.Y.) · 2023Article
- Using a high density bin map to analyze quantitative trait locis of germination ability of maize at low temperatures.Frontiers in plant science · 2022Article
- Roles of Reactive Oxygen Species and Mitochondria in Seed Germination.Frontiers in plant science · 2021Review
- Genome-Wide Association Study Reveals the Genetic Architecture of Seed Vigor in Oats.G3 (Bethesda, Md.) · 2020Article
- Characterization of In Vivo Function(s) of Members of the Plant Mitochondrial Carrier Family.Biomolecules · 2020Review
- Proteomic and Bioinformatic Profiling of Transporters in Higher Plant Mitochondria.Biomolecules · 2020Review
- Metabolic Roles of Plant Mitochondrial Carriers.Biomolecules · 2020Review
- Comprehensive dissection of transcript and metabolite shifts during seed germination and post-germination stages in poplar.BMC plant biology · 2019Article
- Targeted Proteomics Approach Toward Understanding the Role of the Mitochondrial Protease FTSH4 in the Biogenesis of OXPHOS During Arabidopsis Seed Germination.Frontiers in plant science · 2018Article
- Complementary Proteome and Transcriptome Profiling in Developing Grains of a Notched-Belly Rice Mutant Reveals Key Pathways Involved in Chalkiness Formation.Plant & cell physiology · 2017Article
- Mitochondrial Proteome Studies in Seeds during Germination.Proteomes · 2016Review
- Knocking down mitochondrial iron transporter (MIT) reprograms primary and secondary metabolism in rice plants.Journal of experimental botany · 2016Article
- Comprehensive Mitochondrial Metabolic Shift during the Critical Node of Seed Ageing in Rice.PloS one · 2016Article
- Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance.Frontiers in plant science · 2016Review
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Given the substantial changes in mitochondrial gene expression, the mitochondrial proteome, and respiratory function during rice (Oryza sativa) germination under anaerobic and aerobic conditions, we have attempted to identify changes in mitochondrial membrane transport capacity during these processes. We have assembled a preliminary rice mitochondrial carrier gene family of 50 members, defined its orthology to carriers of known function, and observed significant changes in microarray expression data for these rice genes during germination under aerobic and anaerobic conditions and across rice development. To determine if these transcript changes reflect alteration of the carrier profile itself and to determine which members of the family encode the major mitochondrial carrier proteins, we analyzed mitochondrial integral membrane protein preparations using sodium dodecyl sulfate-polyacrylamide gel electrophoresis and peptide mass spectrometry, identifying seven distinct carrier proteins. We have used mass spectrometry-based quantitative approaches to compare the abundance of these carriers between mitochondria from dry seeds and those from aerobic- or anaerobic-germinated seeds. We highlight an anaerobic-enhanced basic amino acid carrier and show concomitant increases in mitochondrial arginase and the abundance of arginine and ornithine in anaerobic-germinated seeds, consistent with an anaerobic role of this mitochondria carrier. The potential role of this carrier in facilitating mitochondrial involvement in arginine metabolism and the plant urea cycle during the growth of rice coleoptiles and early seed nitrate assimilation under anaerobic conditions are discussed.
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