Evidence map›Paper›PMID 20718982›Full record

ArticleBMC cancer2010

Rapid method for determination of DNA repair capacity in human peripheral blood lymphocytes amongst smokers.

Randa A El-Zein, Claudia M Monroy, Andrea Cortes, Margaret R Spitz, Anthony Greisinger, Carol J Etzel

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Oxidized extracellular DNA as a stress signal in human cells.Oxidative medicine and cellular longevity · 2013
    Review
  12. Article
  13. Review
  14. Article
  15. DNA repair: from genome maintenance to biomarker and therapeutic target.Clinical cancer research : an official journal of the American Association for Cancer Research · 2011
    Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Randa A El-ZeinDepartment of Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA. relzein@mdanderson.org
Claudia M Monroy
Andrea Cortes
Margaret R Spitz
Anthony Greisinger
Carol J Etzel
The University of Texas MD Anderson Cancer Center · USWallace Kelsey Research Foundation · GB

Funding

Pilot Project ProgramP30ES007784 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICHIE, ELLEN R · 1996 to 2011
$16.4M
ECOGENETIC STUDY OF LUNG CANCER IN MINORITIESR01CA055769 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 1991 to 2008
$5.3M
Molecular Biomarkers as Predictors of Hodgkin's DiseaseR01CA098549 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI EL-ZEIN, RANDA A · 2003 to 2007
$1.4M
Cytokinesis-blocked micronucleus assay: a predictive biomarker of lung cancer risR21CA129050 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI EL-ZEIN, RANDA A · 2008 to 2009
$381k
NCI NIH HHS CA129050NCI NIH HHS CA55769NCI NIH HHS CA98549NIEHS NIH HHS ES07784
6 · The paper itself

Abstract

backgroundDNA repair capacity is an important determinant of susceptibility to cancer. The hOGG1 enzyme is crucial for repairing the 8-oxoguanine lesion that occurs either as a byproduct of oxidative metabolism or as a result of exogenous sources such as exposure to cigarette smoke. It has been previously reported that smokers with low hOGG1 activity had significantly higher risk of developing lung cancer as compared to smokers with high hOGG1 activity.

methodsIn the current study we elucidate the association between plasma levels of 8-OHdG and the OGG1 repair capacity. We used the commercially available 8-OHdG ELISA (enzyme-linked immunosorbent assay), the Comet assay/FLARE hOGG1 (Fragment Length Analysis by Repair Enzymes) assay for quantification of the levels of 8-OHdG and measured the constitutive, induced and unrepaired residual damage, respectively. We compared the DNA repair capacity in peripheral blood lymphocytes following H2O2 exposure in 30 lung cancer patients, 30 non-, 30 former and 30 current smoker controls matched by age and gender.

resultsOur results show that lung cancer cases and current smoker controls have similar levels of 8-OHdG lesions that are significantly higher compared to the non-smokers controls. However, lung cancer cases showed significantly poorer repair capacity compared to all controls tested, including the current smokers controls. After adjustment for age, gender and family history of smoking-related cancer using linear regression, we observed a 5-fold increase in risk of lung cancer associated with high levels of residual damage/reduced repair capacity. Reduced OGG1 activity could be expected to be a risk factor in other smoking-related cancers.

conclusionOur study shows that the Comet/FLARE assay is a relatively rapid and useful method for determination of DNA repair capacity. Using this assay we could identify individuals with high levels of residual damage and hence poor repair capacity who would be good candidates for intensive follow-up and screening.

Indexed as

DNA RepairCase-Control StudiesComet AssayDNA DamageDNA GlycosylasesEnzyme-Linked Immunosorbent AssayFemaleGuanineHumansHydrogen PeroxideLung NeoplasmsLymphocytesMaleMiddle AgedOxidantsRisk Factors8-hydroxyguanineDNA GlycosylasesGuanineHydrogen PeroxideOxidantsoxoguanine glycosylase 1, human

Identifiers

PMID20718982
PMCPMC2933626
OpenAlexW2122134950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.