Evidence map›Paper›PMID 20716515›Full record

ArticleNucleic acids research2010

MicroRNA-target pairs in human renal epithelial cells treated with transforming growth factor beta 1: a novel role of miR-382.

Alison J Kriegel, Yi Fang, Yong Liu, Zhongmin Tian, Domagoj Mladinov, Isaac R Matus, Xiaoqiang Ding, Andrew S Greene, Mingyu Liang

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Proteomic Profiles of Human Arterioles Isolated From Fresh Adipose Tissue or Following Overnight Storage.Laboratory investigation; a journal of technical methods and pathology · 2024
    Article
  6. Article
  7. TNF inhibits AQP2 expression via a miR137-dependent pathway.American journal of physiology. Renal physiology · 2024
    Article
  8. Kidney fibrosis: from mechanisms to therapeutic medicines.Signal transduction and targeted therapy · 2023
    Review
  9. Review
  10. Article
  11. Article
  12. MicroRNA-382 Promotes M2-Like MacrophageFrontiers in immunology · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Alison J KriegelDepartment of Physiology, Biotechnology and Biomedical Engineering Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Yi Fang
Yong Liu
Zhongmin Tian
Domagoj Mladinov
Isaac R Matus
Xiaoqiang Ding
Andrew S Greene
Mingyu Liang
Medical College of Wisconsin · US

Funding

VASOPRESSIN SECRETION AND CARDIOVASCULAR FUNCTIONP01HL029587 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI COWLEY, ALLEN W · 1985 to 2012
$24.1M
Research ServicesP01HL082798 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI GREENE, ANDREW S. · 2006 to 2015
$22.0M
Mechanisms of Hypertension-induced Renal InjuryR01HL081091 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI COWLEY, ALLEN W · 2006 to 2010
$2.3M
Renal 11b-Hydroxysteroid Dehydrogenases and HypertensionR01HL077263 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI LIANG, MINGYU · 2005 to 2008
$1.4M
MicroRNA-Target Pairs in the KidneyR21DK084405 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LIANG, MINGYU · 2009 to 2010
$418k
MicroRNA, the Kidney, and HypertensionR21HL085267 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI LIANG, MINGYU · 2009 to 2010
$418k
NHLBI NIH HHS HL029587NHLBI NIH HHS HL077263NHLBI NIH HHS HL081091NHLBI NIH HHS HL082798NHLBI NIH HHS HL085267NHLBI NIH HHS N01-HV-28182NIDDK NIH HHS DK084405
6 · The paper itself

Abstract

We reported previously an approach for identifying microRNA (miRNA)-target pairs by combining miRNA and proteomic analyses. The approach was applied in the present study to examine human renal epithelial cells treated with transforming growth factor β1 (TGFβ1), a model of epithelial-mesenchymal transition important for the development of renal interstitial fibrosis. Treatment of human renal epithelial cells with TGFβ1 resulted in upregulation of 16 miRNAs and 18 proteins and downregulation of 17 miRNAs and 16 proteins. Of the miRNAs and proteins that exhibited reciprocal changes in expression, 77 pairs met the sequence criteria for miRNA-target interactions. Knockdown of miR-382, which was up-regulated by TGFβ1, attenuated TGFβ1-induced loss of the epithelial marker E-cadherin. miR-382 was confirmed by 3'-untranslated region reporter assay to target five genes that were downregulated at the protein level by TGFβ1, including superoxide dismutase 2 (SOD2). Knockdown of miR-382 attenuated TGFβ1-induced downregulation of SOD2. Overexpression of SOD2 ameliorated TGFβ1-induced loss of the epithelial marker. The study provided experimental evidence in the form of reciprocal expression at the protein level for a large number of predicted miRNA-target pairs and discovered a novel role of miR-382 and SOD2 in the loss of epithelial characteristics induced by TGFβ1.

Indexed as

Cell LineEpithelial CellsGene Expression ProfilingGene Expression RegulationHumansKidneyMicroRNAsProteomeSuperoxide DismutaseSuperoxide Dismutase 2Transforming Growth Factor beta1MicroRNAsMIRN382 microRNA, humanProteomeSuperoxide DismutaseSuperoxide Dismutase 2Transforming Growth Factor beta1

Identifiers

PMID20716515
PMCPMC3001085
OpenAlexW2112063492

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.