Evidence map›Paper›PMID 20715794›Full record

ArticleBiochemistry2010

Converting GLX2-1 into an active glyoxalase II.

Pattraranee Limphong, Nicole E Adams, Matthew F Rouhier, Ross M McKinney, Melissa Naylor, Brian Bennett, Christopher A Makaroff, Michael W Crowder

Abstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Pattraranee LimphongDepartment of Chemistry and Biochemistry, 160 Hughes Hall, Miami University, Oxford, Ohio 45056, USA.
Nicole E Adams
Matthew F Rouhier
Ross M McKinney
Melissa Naylor
Brian Bennett
Christopher A Makaroff
Michael W Crowder
Miami University · USMedical College of Wisconsin · US

Funding

TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
Substrate &Inhibitor Binding in Leucine AminopeptidaseR01AI056231 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI BENNETT, BRIAN · 2003 to 2007
$923k
Arabidopsis AtETHE1, A model to understand the metabolic role of ETHE1R15GM076199 · NIGMS · MIAMI UNIVERSITY OXFORD · PI MAKAROFF, CHRISTOPHER A · 2008 to 2008
$213k
NIAID NIH HHS AI056231NIAID NIH HHS R01 AI056231NIBIB NIH HHS EB001980NIBIB NIH HHS P41 EB001980NIGMS NIH HHS GM076199NIGMS NIH HHS R15 GM076199
6 · The paper itself

Abstract

Arabidopsis thaliana glyoxalase 2-1 (GLX2-1) exhibits extensive sequence similarity with GLX2 enzymes but is catalytically inactive with SLG, the GLX2 substrate. In an effort to identify residues essential for GLX2 activity, amino acid residues were altered at positions 219, 246, 248, 325, and 328 in GLX2-1 to be the same as those in catalytically active human GLX2. The resulting enzymes were overexpressed, purified, and characterized using metal analyses, fluorescence spectroscopy, and steady-state kinetics to evaluate how these residues affect metal binding, structure, and catalysis. The R246H/N248Y double mutant exhibited low level S-lactoylglutathione hydrolase activity, while the R246H/N248Y/Q325R/R328K mutant exhibited a 1.5-2-fold increase in k(cat) and a decrease in K(m) as compared to the values exhibited by the double mutant. In contrast, the R246H mutant of GLX2-1 did not exhibit glyoxalase 2 activity. Zn(II)-loaded R246H GLX2-1 enzyme bound 2 equiv of Zn(II), and (1)H NMR spectra of the Co(II)-substituted analogue of this enzyme strongly suggest that the introduced histidine binds to Co(II). EPR studies indicate the presence of significant amounts a dinuclear metal ion-containing center. Therefore, an active GLX2 enzyme requires both the presence of a properly positioned metal center and significant nonmetal, enzyme-substrate contacts, with tyrosine 255 being particularly important.

Indexed as

ArabidopsisCatalysisGlutathioneHistidineHumansHydroxyacylglutathione HydrolaseKineticsLactoylglutathione LyaseMagnetic Resonance SpectroscopyMetalsSubstrate SpecificityThiolester HydrolasesGlutathioneHistidineHydroxyacylglutathione HydrolaseLactoylglutathione LyaseMetalsS-lactoylglutathioneThiolester Hydrolases

Identifiers

PMID20715794
PMCPMC2939260
OpenAlexW2088066159

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.