Evidence map›Paper›PMID 20713738›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Amphiphile regulation of ion channel function by changes in the bilayer spring constant.

Jens A Lundbaek, Roger E Koeppe, Olaf S Andersen

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 121 citations in OpenAlex.

  1. Article
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  10. Review
  11. Article
  12. Article
  13. Capsaicin as an amphipathic modulator of NaChannels (Austin, Tex.) · 2022
    Article
  14. Article
  15. Membrane Interactivity of Capsaicin Antagonized by Capsazepine.International journal of molecular sciences · 2022
    Article
  16. Article
  17. Article
  18. Mechanisms underlying drug-mediated regulation of membrane protein function.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Review
  20. Cyclodextrins increase membrane tension and are universal activators of mechanosensitive channels.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Jens A LundbaekDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, NY 10065, USA. lundbaek@dadlnet.dk
Roger E Koeppe
Olaf S Andersen
Cornell University · USTechnical University of Denmark · DKUniversity of Arkansas at Fayetteville · US

Funding

Structure based drug discoveryP20RR015569 · NCRR · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI MILLETT, FRANCIS S · 2000 to 2009
$21.4M
Energetics of Channel-Bilayer InteractionsR01GM021342 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ANDERSEN, OLAF S. · 1985 to 2021
$9.9M
NCRR NIH HHS P20 RR015569NCRR NIH HHS RR015569NIGMS NIH HHS GM021342NIGMS NIH HHS R01 GM021342
6 · The paper itself

Abstract

Many drugs are amphiphiles that, in addition to binding to a particular target protein, adsorb to cell membrane lipid bilayers and alter intrinsic bilayer physical properties (e.g., bilayer thickness, monolayer curvature, and elastic moduli). Such changes can modulate membrane protein function by altering the energetic cost (DeltaG(bilayer)) of bilayer deformations associated with protein conformational changes that involve the protein-bilayer interface. But amphiphiles have complex effects on the physical properties of lipid bilayers, meaning that the net change in DeltaG(bilayer) cannot be predicted from measurements of isolated changes in such properties. Thus, the bilayer contribution to the promiscuous regulation of membrane proteins by drugs and other amphiphiles remains unknown. To overcome this problem, we use gramicidin A (gA) channels as molecular force probes to measure the net effect of amphiphiles, at concentrations often used in biological research, on the bilayer elastic response to a change in the hydrophobic length of an embedded protein. The effects of structurally diverse amphiphiles can be described by changes in a phenomenological bilayer spring constant (H(B)) that summarizes the bilayer elastic properties, as sensed by a bilayer-spanning protein. Amphiphile-induced changes in H(B), measured using gA channels of a particular length, quantitatively predict changes in lifetime for channels of a different length--as well as changes in the inactivation of voltage-dependent sodium channels in living cells. The use of gA channels as molecular force probes provides a tool for quantitative, predictive studies of bilayer-mediated regulation of membrane protein function by amphiphiles.

Indexed as

AlgorithmsCapsaicinCell LineCell MembraneGenisteinGramicidinHumansHydrogen-Ion ConcentrationHydrophobic and Hydrophilic InteractionsIon Channel GatingIon ChannelsIsoflavonesKineticsLipid BilayersMembrane PotentialsMembrane Proteins1,2-diphytanoylphosphatidylcholine1,2-oleoylphosphatidylcholineCapsaicincapsazepinedaidzeinGenisteinGramicidinIon ChannelsIsoflavonesLipid BilayersMembrane ProteinsOctoxynolPhloretinPhosphatidylcholines

Identifiers

PMID20713738
PMCPMC2932597
OpenAlexW1997438392

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.