Evidence map›Paper›PMID 20713017›Full record

ArticleBiophysical journal2010

Mapping dynamic protein interactions to insulin secretory granule behavior with TIRF-FRET.

Alice D Lam, Sahar Ismail, Ray Wu, Ofer Yizhar, Daniel R Passmore, Stephen A Ernst, Edward L Stuenkel

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Combining TIR and FRET in Molecular Test Systems.International journal of molecular sciences · 2019
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Fluorescence techniques to study lipid dynamics.Cold Spring Harbor perspectives in biology · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Alice D LamDepartment of Molecular and Integrative Physiology and Neuroscience Program, University of Michigan, Ann Arbor, Michigan, USA.
Sahar Ismail
Ray Wu
Ofer Yizhar
Daniel R Passmore
Stephen A Ernst
Edward L Stuenkel
University of Michigan · USStanford University · US

Funding

PUBLIC HEALTH DEMONSTRATIONP60DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MYERS, MARTIN G · 1985 to 2012
$26.5M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAVID P OLSON · 2013 to 2026
$24.3M
University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1986 to 2021
$22.5M
Regulation of tomosyn-SNARE complex assembly in neurosecretionR01NS053978 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STUENKEL, EDWARD L · 2006 to 2010
$1.6M
Mechanisms of Rab27 regulation of insulin secretionR01DK077050 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STUENKEL, EDWARD L · 2009 to 2012
$1.5M
Defining the Role of Lipid Rafts in NeurotransmissionF31NS053263 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LAM, ALICE D · 2005 to 2007
$92k
Mechanisms of Rab27 regulation of insulin secretionR56DK077050 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STUENKEL, EDWARD L · 2006 to 2006
$76k
NIDDK NIH HHS B30 DK-34933NIDDK NIH HHS DK020572NIDDK NIH HHS DK077050NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P60 DK020572NIDDK NIH HHS R01 DK077050NIDDK NIH HHS R56 DK077050NINDS NIH HHS F31 NS053263NINDS NIH HHS NS053978NINDS NIH HHS R01 NS053978
6 · The paper itself

Abstract

Biological processes are governed by extensive networks of dynamic molecular interactions. Yet, establishing a spatial and temporal map of these interactions and their direct relationship to specific cell functions has remained a challenge. Here, we implement sensitized emission Förster resonance energy transfer (FRET) stoichiometry under total internal reflection fluorescence (TIRF) microscopy. We demonstrate through quantitative analysis and modeling that evanescent fields must be precisely matched between FRET excitation wavelengths to isolate dynamic interactions between bimolecular FRET pairs that are not entirely membrane-delimited. We then use TIRF-FRET to monitor the behavior of individual insulin-containing secretory granules at the plasma membrane of living cells, while simultaneously tracking the dynamic interaction between the GTPase Rab27A and its effector Slp4A, on those same granules. Notably, insulin granules that underwent exocytosis demonstrated a specific increase in Rab27A-GTP/Slp4A FRET in the 5 s before membrane fusion, which coincided temporally with an increase in granule displacement and mobility. These results demonstrate an initial spatiotemporal mapping of a dynamic protein-protein interaction on individual secretory granules that is linked to a specific granule behavior in living cells.

Indexed as

AnimalsCalibrationCell LineFluorescence Resonance Energy TransferFluorescent DyesInsulinInsulin SecretionMiceMicroscopy, FluorescenceProtein BindingProtein Interaction Mappingrab27 GTP-Binding Proteinsrab GTP-Binding ProteinsSecretory VesiclesSolubilityTransfectionFluorescent DyesInsulinRab27a protein, mouserab27 GTP-Binding Proteinsrab GTP-Binding ProteinsVesicular Transport Proteins

Identifiers

PMID20713017
PMCPMC2920663
OpenAlexW2027175865

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.