Evidence map›Paper›PMID 20713013›Full record

ArticleBiophysical journal2010

Three-color spectral FRET microscopy localizes three interacting proteins in living cells.

Yuansheng Sun, Horst Wallrabe, Cynthia F Booker, Richard N Day, Ammasi Periasamy

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
10.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 66 citations in OpenAlex.

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  11. Monitoring ligand-dependent assembly of receptor ternary complexes in live cells by BRETFect.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Review
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  15. A Guide to Fluorescent Protein FRET Pairs.Sensors (Basel, Switzerland) · 2016
    Review
  16. Review
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yuansheng SunW. M. Keck Center for Cellular Imaging, Departments of Biology and Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
Horst Wallrabe
Cynthia F Booker
Richard N Day
Ammasi Periasamy
University of Virginia · USIndiana University School of MedicineUniversity of Virginia Health System · US

Funding

Tunable White Light Laser Confocal/Spectral Imaging MicroscopyS10RR025616 · NCRR · UNIVERSITY OF VIRGINIA · PI PERIASAMY, AMMASI · 2009 to 2009
$500k
NCRR NIH HHS S10 RR025616NIDDK NIH HHS DK47301
6 · The paper itself

Abstract

FRET technologies are now routinely used to establish the spatial relationships between two cellular components (A and B). Adding a third target component (C) increases the complexity of the analysis between interactions AB/BC/AC. Here, we describe a novel method for analyzing a three-color (ABC) FRET system called three-color spectral FRET (3sFRET) microscopy, which is fully corrected for spectral bleedthrough. The approach quantifies FRET signals and calculates the apparent energy transfer efficiencies (Es). The method was validated by measurement of a genetic (FRET standard) construct consisting of three different fluorescent proteins (FPs), mTFP, mVenus, and tdTomato, linked sequentially to one another. In addition, three 2-FP reference constructs, tethered in the same way as the 3-FP construct, were used to characterize the energy transfer pathways. Fluorescence lifetime measurements were employed to compare the relative relationships between the FPs in cells producing the 3-FP and 2-FP fusion proteins. The 3sFRET microscopy method was then applied to study the interactions of the dimeric transcription factor C/EBPalpha (expressing mTFP or mVenus) with the heterochromatin protein 1alpha (HP1alpha, expressing tdTomato) in live-mouse pituitary cells. We show how the 3sFRET microscopy method represents a promising live-cell imaging technique to monitor the interactions between three labeled cellular components.

Indexed as

AlgorithmsAnimalsCCAAT-Enhancer-Binding ProteinsCell LineCell SurvivalChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneFluorescence Resonance Energy TransferLuminescent ProteinsMiceMicroscopy, FluorescenceProtein BindingProtein MultimerizationProtein TransportReference StandardsCCAAT-Enhancer-Binding ProteinsCEBPA protein, mouseChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneLuminescent Proteins

Identifiers

PMID20713013
PMCPMC2920763
OpenAlexW1981807279

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.