Evidence map›Paper›PMID 20712981›Full record

ArticleBiophysical journal2010

High mobility of bicoid captured by fluorescence correlation spectroscopy: implication for the rapid establishment of its gradient.

Asmahan Abu-Arish, Aude Porcher, Anna Czerwonka, Nathalie Dostatni, Cécile Fradin

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 114 citations in OpenAlex.

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  14. Trading bits in the readout from a genetic network.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  20. Phase separation at the nanoscale quantified by dcFCCS.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Asmahan Abu-ArishDepartment of Physics and Astronomy, McMaster University, Hamilton, Ontario, Canada.
Aude Porcher
Anna Czerwonka
Nathalie Dostatni
Cécile Fradin
McMaster University · CAInstitut Curie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Bicoid (Bcd) morphogen is essential for pattern formation in fruit flies. It forms an exponential concentration gradient along the embryo AP axis and turns on cascades of target genes in distinct anterior domains. The most commonly accepted model for gradient formation assumes that Bcd travels by simple diffusion and is uniformly degraded across syncytial embryos, yet several recent studies have challenged these ideas. Here, the question of Bcd mobility was investigated using fluorescence correlation spectroscopy in live Drosophila melanogaster embryos. Bcd-EGFP molecules were found to be highly mobile in the cytoplasm during cycles 12-14, with a diffusion coefficient approximately 7 microm(2)/s. This value is large enough to explain the stable establishment of the Bcd gradient simply by diffusion before cycle 8, i.e., before the onset of zygotic transcription.

Indexed as

AnimalsDiffusionDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianFluorescence Recovery After PhotobleachingGreen Fluorescent ProteinsHomeodomain ProteinsModels, BiologicalNuclear Localization SignalsProtein TransportRecombinant Fusion ProteinsSpectrometry, FluorescenceTrans-Activatorsbcd protein, DrosophilaDrosophila Proteinsenhanced green fluorescent proteinGreen Fluorescent ProteinsHomeodomain ProteinsNuclear Localization SignalsRecombinant Fusion ProteinsTrans-Activators

Identifiers

PMID20712981
PMCPMC2920644
OpenAlexW1992043587

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.