Evidence map›Paper›PMID 20711191›Full record

ArticleNature structural & molecular biology2010

Tissue- and age-specific DNA replication patterns at the CTG/CAG-expanded human myotonic dystrophy type 1 locus.

John D Cleary, Stéphanie Tomé, Arturo López Castel, Gagan B Panigrahi, Laurent Foiry, Katharine A Hagerman, Hana Sroka, David Chitayat, Geneviève Gourdon, Christopher E Pearson

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Article in Nature structural & molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 63 citations in OpenAlex.

  1. Functional Aspects of Sperm Chromatin Organization.Results and problems in cell differentiation · 2022
    Review
  2. Epigenetics of Myotonic Dystrophies: A Minireview.International journal of molecular sciences · 2021
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Myotonic Dystrophy Type 1 Management and Therapeutics.Current treatment options in neurology · 2016
    Review
  15. Article
  16. ORC proteins in the mammalian zygote.Cell and tissue research · 2016
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

John D ClearyProgram of Genetics & Genome Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.
Stéphanie Tomé
Arturo López Castel
Gagan B Panigrahi
Laurent Foiry
Katharine A Hagerman
Hana Sroka
David Chitayat
Geneviève Gourdon
Christopher E Pearson
Hospital for Sick Children · CAHôpital Necker-Enfants Malades · FRMount Sinai Hospital · CAUniversité Paris Cité · FRUniversity of Toronto · CA

Funding

Training and Educational CoreU54NS048843 · NINDS · UNIVERSITY OF ROCHESTER · PI DIRKSEN, ROBERT T · 2003 to 2017
$21.9M
Canadian Institutes of Health ResearchNINDS NIH HHS U54NS48843
6 · The paper itself

Abstract

Myotonic dystrophy, caused by DM1 CTG/CAG repeat expansions, shows varying instability levels between tissues and across ages within patients. We determined DNA replication profiles at the DM1 locus in patient fibroblasts and tissues from DM1 transgenic mice of various ages showing different instability. In patient cells, the repeat is flanked by two replication origins demarcated by CTCF sites, with replication diminished at the expansion. In mice, the expansion replicated from only the downstream origin (CAG as lagging template). In testes from mice of three different ages, replication toward the repeat paused at the earliest age and was relieved at later ages-coinciding with increased instability. Brain, pancreas and thymus replication varied with CpG methylation at DM1 CTCF sites. CTCF sites between progressing forks and repeats reduced replication depending on chromatin. Thus, varying replication progression may affect tissue- and age-specific repeat instability.

Indexed as

AgingDNA ReplicationAnimalsBinding SitesCCCTC-Binding FactorChromosomes, Human, Pair 19CpG IslandsDNADNA MethylationGenetic LociHumansMiceMice, TransgenicMyotonic DystrophyOrgan SpecificityRepressor ProteinsCCCTC-Binding FactorCTCF protein, humanCtcf protein, mouseDNARepressor Proteins

Identifiers

PMID20711191
OpenAlexW1991720664

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.