Evidence map›Paper›PMID 20711169›Full record

ArticleThe EMBO journal2010

Rif1 provides a new DNA-binding interface for the Bloom syndrome complex to maintain normal replication.

Dongyi Xu, Parameswary Muniandy, Elisabetta Leo, Jinhu Yin, Saravanabhavan Thangavel, Xi Shen, Miki Ii, Keli Agama, Rong Guo, David Fox and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 100 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. DNA Double-Strand Breaks as Pathogenic Lesions in Neurological Disorders.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Fused in sarcoma regulates DNA replication timing and kinetics.The Journal of biological chemistry · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 3 countries.

Dongyi XuLaboratory of Genetics, National Institute on Aging, National Institutes of Health, Baltimore, MD, USA.
Parameswary Muniandy
Elisabetta Leo
Jinhu Yin
Saravanabhavan Thangavel
Xi Shen
Miki Ii
Keli Agama
Rong Guo
David Fox
Amom Ruhikanta Meetei
Lauren Wilson
Huy Nguyen
Nan-ping Weng
Steven J Brill
Lei Li
Alessandro Vindigni
Yves Pommier
Michael Seidman
Weidong Wang
National Institute on Aging · USCenter for Cancer Research · USInstitute on Aging · USNational Institutes of Health · USRutgers, The State University of New Jersey · USThe University of Texas MD Anderson Cancer Center · USInternational Centre for Genetic Engineering and Biotechnology · ITNational Center for Genetic Engineering and Biotechnology · TH

Funding

Repair of localized DNA damageZIAAG000746 · NIA · NATIONAL INSTITUTE ON AGING · PI SEIDMAN, MICHAEL · 2009 to 2025
$30.0M
DNA Repair, Cell Cycle Checkpoints and Apoptosis as Targets for Anticancer DrugsZIABC006150 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 2009 to 2025
$23.0M
Identification and characterization Of A Complex Involved In Bloom SyndromeZIAAG000657 · NIA · NATIONAL INSTITUTE ON AGING · PI WANG, WEIDONG · 2009 to 2021
$6.2M
Role of Telomere In Human Lymphocyte Function and AgingZIAAG000756 · NIA · NATIONAL INSTITUTE ON AGING · PI WENG, NAN-PING PETER · 2009 to 2025
$5.5M
Genomic Stability and RecQ DNA Helicases in YeastR01GM071268 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI BRILL, STEVEN J. · 2004 to 2012
$2.5M
ISOLATION OF PROTEIN COMPLEX INVOLVED IN BLOOM SYNDROMEZ01AG000657 · NIA · NATIONAL INSTITUTE ON AGING · PI WANG, WEIDONG · 2000 to 2008
$636k
Intramural NIH HHS Z01 AG000657NIGMS NIH HHS GM071268NIGMS NIH HHS R01 GM071268
6 · The paper itself

Abstract

BLM, the helicase defective in Bloom syndrome, is part of a multiprotein complex that protects genome stability. Here, we show that Rif1 is a novel component of the BLM complex and works with BLM to promote recovery of stalled replication forks. First, Rif1 physically interacts with the BLM complex through a conserved C-terminal domain, and the stability of Rif1 depends on the presence of the BLM complex. Second, Rif1 and BLM are recruited with similar kinetics to stalled replication forks, and the Rif1 recruitment is delayed in BLM-deficient cells. Third, genetic analyses in vertebrate DT40 cells suggest that BLM and Rif1 work in a common pathway to resist replication stress and promote recovery of stalled forks. Importantly, vertebrate Rif1 contains a DNA-binding domain that resembles the αCTD domain of bacterial RNA polymerase α; and this domain preferentially binds fork and Holliday junction (HJ) DNA in vitro and is required for Rif1 to resist replication stress in vivo. Our data suggest that Rif1 provides a new DNA-binding interface for the BLM complex to restart stalled replication forks.

Indexed as

DNA ReplicationAmino Acid SequenceAnimalsBlotting, WesternCarrier ProteinsCell LineChickensDNADNA-Binding ProteinsHeLa CellsHumansImmunoprecipitationKidneyMolecular Sequence DataNuclear ProteinsRecQ HelicasesBloom syndrome proteinCarrier ProteinsDNADNA-Binding ProteinsNuclear ProteinsRecQ HelicasesRif1 protein, humanRMI1 protein, humanRMI2 protein, humanRNA, Small InterferingTelomere-Binding Proteins

Identifiers

PMID20711169
PMCPMC2944062
OpenAlexW2078438237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.