Evidence map›Paper›PMID 20709846›Full record

ArticleApplied and environmental microbiology2010

Genotype and antibiotic resistance analyses of Campylobacter isolates from ceca and carcasses of slaughtered broiler flocks.

Simone E Wirz, Gudrun Overesch, Peter Kuhnert, Bozena M Korczak

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

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0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. The Distribution ofGenes · 2021
    Article
  4. Article
  5. Prediction of antimicrobial resistance in clinical Campylobacter jejuni isolates from whole-genome sequencing data.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
  6. AssessingPathogens (Basel, Switzerland) · 2020
    Article
  7. Article
  8. Review on Stress Tolerance inFrontiers in cellular and infection microbiology · 2020
    Review
  9. Article
  10. Frontiers in microbiology · 2019
    Article
  11. Typing ofVeterinary and animal science · 2018
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Genotypes and antibiotic resistances of Campylobacter jejuni isolates from cattle and pigeons in dairy farms.International journal of environmental research and public health · 2014
    Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Simone E WirzInstitute of Veterinary Bacteriology, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Gudrun Overesch
Peter Kuhnert
Bozena M Korczak

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To obtain genetic information about Campylobacter jejuni and Campylobacter coli from broilers and carcasses at slaughterhouses, we analyzed and compared 340 isolates that were collected in 2008 from the cecum right after slaughter or from the neck skin after processing. We performed rpoB sequence-based identification, multilocus sequence typing (MLST), and flaB sequence-based typing; we additionally analyzed mutations within the 23S rRNA and gyrA genes that confer resistance to macrolide and quinolone antibiotics, respectively. The rpoB-based identification resulted in a distribution of 72.0% C. jejuni and 28.0% C. coli. The MLST analysis revealed that there were 59 known sequence types (STs) and 6 newly defined STs. Most of the STs were grouped into 4 clonal complexes (CC) that are typical for poultry (CC21, CC45, CC257, and CC828), and these represented 61.8% of all of the investigated isolates. The analysis of 95 isolates from the cecum and from the corresponding carcass neck skin covered 44 different STs, and 54.7% of the pairs had matching genotypes. The data indicate that cross-contamination from various sources during slaughter may occur, although the majority of Campylobacter contamination on carcasses appeared to originate from the slaughtered flock itself. Mutations in the 23S rRNA gene were found in 3.1% of C. coli isolates, although no mutations were found in C. jejuni isolates. Mutations in the gyrA gene were observed in 18.9% of C. jejuni and 26.8% of C. coli isolates, which included two C. coli strains that carried mutations conferring resistance to both classes of antibiotics. A relationship between specific genotypes and antibiotic resistance/susceptibility was observed.

Indexed as

Drug Resistance, BacterialAbattoirsAnimalsAnti-Bacterial AgentsBacterial Typing TechniquesCampylobacter coliCampylobacter jejuniCecumChickensCluster AnalysisDNA, BacterialDNA-Directed RNA PolymerasesDNA FingerprintingDNA GyraseFlagellinGenotypeAnti-Bacterial AgentsDNA, BacterialDNA-Directed RNA PolymerasesDNA GyraseflaB flagellinFlagellinRNA polymerase beta subunitRNA, Ribosomal, 23S

Identifiers

PMID20709846
PMCPMC2950462

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.