Evidence map›Paper›PMID 20705608›Full record

ArticleThe Journal of biological chemistry2010

Interfacial kinetic and binding properties of mammalian group IVB phospholipase A2 (cPLA2beta) and comparison with the other cPLA2 isoforms.

Farideh Ghomashchi, Gajendra S Naika, James G Bollinger, Ahmed Aloulou, Matthias Lehr, Christina C Leslie, Michael H Gelb

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Updating Phospholipase ABiomolecules · 2020
    Review
  4. Lipid-metabolizing serine hydrolases in the mammalian central nervous system: endocannabinoids and beyond.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2019
    Review
  5. Lipoquality control by phospholipase AProceedings of the Japan Academy. Series B, Physical and biological sciences · 2017
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Eicosanoids in metabolic syndrome.Advances in pharmacology (San Diego, Calif.) · 2013
    Review
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Farideh GhomashchiDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA.
Gajendra S Naika
James G Bollinger
Ahmed Aloulou
Matthias Lehr
Christina C Leslie
Michael H Gelb
University of Washington · USUniversity of Colorado Denver · USUniversity of Ulster · GB

Funding

TRANSLOCATION AND TRANSCELLULAR BIOSYNTHESISP01HL034303 · NHLBI · NATIONAL JEWISH HEALTH · PI BARKLEY, ROBERT · 1985 to 2015
$25.0M
REGULATION OF PHOSPHOLIPASE A2 NUCLEAR TARGETINGR01HL061378 · NHLBI · NATIONAL JEWISH HEALTH · PI LESLIE, CHRISTINA CARROLL · 1999 to 2011
$4.1M
Regulation and Function of Cytosolic Phospholipase A2R01HL050040 · NHLBI · UNIVERSITY OF WASHINGTON · PI GELB, MICHAEL H · 1993 to 2012
$2.4M
NHLBI NIH HHS HL34303NHLBI NIH HHS HL50040NHLBI NIH HHS HL61378NHLBI NIH HHS P01 HL034303NHLBI NIH HHS R01 HL050040NHLBI NIH HHS R01 HL061378
6 · The paper itself

Abstract

The cytosolic (group IV) phospholipase A(2) (cPLA(2)s) family contains six members. We have prepared recombinant proteins for human α, mouse β, human γ, human δ, human ε, and mouse ζ cPLA(2)s and have studied their interfacial kinetic and binding properties in vitro. Mouse cPLA(2)β action on phosphatidylcholine vesicles is activated by anionic phosphoinositides and cardiolipin but displays a requirement for Ca(2+) only in the presence of cardiolipin. This activation pattern is explained by the effects of anionic phospholipids and Ca(2+) on the interfacial binding of mouse cPLA(2)β and its C2 domain to vesicles. Ca(2+)-dependent binding of mouse cPLA(2)β to cardiolipin-containing vesicles requires a patch of basic residues near the Ca(2+)-binding surface loops of the C2 domain, but binding to phosphoinositide-containing vesicles does not depend on any specific cluster of basic residues. Human cPLA(2)δ also displays Ca(2+)- and cardiolipin-enhanced interfacial binding and activity. The lysophospholipase, phospholipase A(1), and phospholipase A(2) activities of the full set of mammalian cPLA(2)s were quantified. The relative level of these activities is very different among the isoforms, and human cPLA(2)δ stands out as having relatively high phospholipase A(1) activity. We also tested the susceptibility of all cPLA(2) family members to a panel of previously reported inhibitors of human cPLA(2)α and analogs of these compounds. This led to the discovery of a potent and selective inhibitor of mouse cPLA(2)β. These in vitro studies help determine the regulation and function of the cPLA(2) family members.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBinding SitesBiocatalysisCalciumCell LineElectrophoresis, Polyacrylamide GelEnzyme InhibitorsGroup IV Phospholipases A2HumansHydrolysisIsoenzymesKineticsMiceModels, MolecularCalciumEnzyme InhibitorsGroup IV Phospholipases A2IsoenzymesPhospholipases A2, CytosolicPhospholipidsRecombinant Proteins

Identifiers

PMID20705608
PMCPMC2975232
OpenAlexW2080608006

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.