Evidence map›Paper›PMID 20704348›Full record

ArticleJournal of proteome research2010

Mass spectrometry-based neuropeptidomics of secretory vesicles from human adrenal medullary pheochromocytoma reveals novel peptide products of prohormone processing.

Nitin Gupta, Steven J Bark, Weiya D Lu, Laurent Taupenot, Daniel T O'Connor, Pavel Pevzner, Vivian Hook

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  13. Recent advances in quantitative neuroproteomics.Methods (San Diego, Calif.) · 2013
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. NeuroPedia: neuropeptide database and spectral library.Bioinformatics (Oxford, England) · 2011
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nitin GuptaBioinformatics Graduate Program, School of Medicine, University of California, San Diego, La Jolla, California 92093, USA.
Steven J Bark
Weiya D Lu
Laurent Taupenot
Daniel T O'Connor
Pavel Pevzner
Vivian Hook
University of Montana · USUniversity of California, San Diego · US

Funding

Trafficking of catecholamine storage vesicle proteinsP01HL058120 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI O'CONNOR, DANIEL T · 1999 to 2009
$18.5M
CENTER FOR COMPUTATIONAL MASS-SPECTROMETRYP41RR024851 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PEVZNER, PAVEL A · 2008 to 2011
$5.2M
Computer Mass-SpectrometryR01RR016522 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PEVZNER, PAVEL A · 2002 to 2008
$3.6M
TRAINING IN NEUROSCIENCE RELATED TO DRUG ABUSET32DA007315 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOOK, VIVIAN Y. H · 2000 to 2013
$2.7M
Serpin Protease Inhibitors &Opioid NeuropeptidesR01NS024553 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOOK, VIVIAN Y. H. · 1987 to 2006
$2.5M
BIOSYNTHESIS OF ENKEPHALIN OPIOID PEPTIDESR01DA004271 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOOK, VIVIAN Y. H · 1987 to 2009
$2.5M
POMC Processing Beta-Endorphin-Related Opioid PeptidesR01MH077305 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HOOK, VIVIAN Y. H · 2006 to 2010
$1.6M
Cathepsin L in the Biosynthesis of Enkephalins and beta-Endorphin Opioid PeptidesK01DA023065 · NIDA · UNIVERSITY OF HOUSTON · PI BARK, STEVEN · 2008 to 2012
$735k
Proenkephalin Processing for Biosynthesis of Enkephalin Peptide NeutrotransmitterF32DA024960 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LU, WEIYA DOUGLAS · 2008 to 2009
$105k
Howard Hughes Medical InstituteNCRR NIH HHS 1-P41-RR024851NCRR NIH HHS 5R01RR016522NCRR NIH HHS P41 RR024851NCRR NIH HHS R01 RR016522NHLBI NIH HHS P01 HL058120NHLBI NIH HHS P01HL581290NIDA NIH HHS F32 DA024960NIDA NIH HHS K01 DA023065NIDA NIH HHS K01DA023065NIDA NIH HHS R01 DA004271NIDA NIH HHS R01DA04271NIDA NIH HHS T32 DA007315NIDA NIH HHS T32 DA07315NIMH NIH HHS R01 MH077305NIMH NIH HHS R01MH077305NINDS NIH HHS R01 NS024553
6 · The paper itself

Abstract

Neuropeptides are required for cell-cell communication in the regulation of physiological and pathological processes. While selected neuropeptides of known biological activities have been studied, global analyses of the endogenous profile of human peptide products derived from prohormones by proteolytic processing in vivo are largely unknown. Therefore, this study utilized the global, unbiased approach of mass spectrometry-based neuropeptidomics to define peptide profiles in secretory vesicles, isolated from human adrenal medullary pheochromocytoma of the sympathetic nervous system. The low molecular weight pool of secretory vesicle peptides was subjected to nano-LC-MS/MS with ion trap and QTOF mass spectrometry analyzed by different database search tools (InsPecT and Spectrum Mill). Peptides were generated by processing of prohormones at dibasic cleavage sites as well as at nonbasic residues. Significantly, peptide profiling provided novel insight into newly identified peptide products derived from proenkephalin, pro-NPY, proSAAS, CgA, CgB, and SCG2 prohormones. Previously unidentified intervening peptide domains of prohormones were observed, thus providing new knowledge of human neuropeptidomes generated from precursors. The global peptidomic approach of this study demonstrates the complexity of diverse neuropeptides present in human secretory vesicles for cell-cell communication.

Indexed as

Adrenal Gland NeoplasmsAdrenal MedullaAmino Acid SequenceCell CommunicationChromaffin GranulesChromatography, LiquidEnkephalinsHumansMass SpectrometryMolecular Sequence DataNeuropeptidesPeptidesPheochromocytomaProtein PrecursorsProteomicsSecretogranin IIEnkephalinsNeuropeptidesPeptidesproenkephalinProtein PrecursorsSCG2 protein, humanSecretogranin II

Identifiers

PMID20704348
PMCPMC3000314
OpenAlexW2020727975

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.