Evidence map›Paper›PMID 20702586›Full record

ArticleMolecular biology of the cell2010

Cdk phosphorylation of a nucleoporin controls localization of active genes through the cell cycle.

Donna Garvey Brickner, Jason H Brickner

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Nuclear pore complexes and regulation of gene expression.Current opinion in cell biology · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Microbial cell (Graz, Austria) · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Donna Garvey BricknerDepartment of Biochemistry, Molecular Biology and Cell Biology, Northwestern University, Evanston, IL 60208, USA.
Jason H Brickner
Northwestern University · US

Funding

Role of DNA localization in regulating transcriptionR01GM080484 · NIGMS · NORTHWESTERN UNIVERSITY · PI BRICKNER, JASON HAYS · 2007 to 2019
$3.6M
NIGMS NIH HHS GM080484NIGMS NIH HHS R01 GM080484
6 · The paper itself

Abstract

Many inducible genes in yeast are targeted to the nuclear pore complex when active. We find that the peripheral localization of the INO1 and GAL1 genes is regulated through the cell cycle. Active INO1 and GAL1 localized at the nuclear periphery during G1, became nucleoplasmic during S-phase, and then returned to the nuclear periphery during G2/M. Loss of peripheral targeting followed the initiation of DNA replication and was lost in cells lacking a cyclin-dependent kinase (Cdk) inhibitor. Furthermore, the Cdk1 kinase and two Cdk phosphorylation sites in the nucleoporin Nup1 were required for peripheral targeting of INO1 and GAL1. Introduction of aspartic acid residues in place of either of these two sites in Nup1 bypassed the requirement for Cdk1 and resulted in targeting of INO1 and GAL1 to the nuclear periphery during S-phase. Thus, phosphorylation of a nuclear pore component by cyclin dependent kinase controls the localization of active genes to the nuclear periphery through the cell cycle.

Indexed as

CDC2 Protein KinaseCell CycleDNA ReplicationGalactokinaseGenes, FungalMutationMyo-Inositol-1-Phosphate SynthaseNuclear EnvelopeNuclear Pore Complex ProteinsPhosphorylationProtein Kinase InhibitorsRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCDC2 Protein KinaseGAL1 protein, S cerevisiaeGalactokinaseINO1 protein, S cerevisiaeMyo-Inositol-1-Phosphate SynthaseNuclear Pore Complex ProteinsNUP1 protein, S cerevisiaeProtein Kinase InhibitorsRepressor ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID20702586
PMCPMC2947477
OpenAlexW2101922244

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.