Evidence map›Paper›PMID 20702582›Full record

ArticleMolecular biology of the cell2010

Small molecule inhibition of HIV-1-induced MHC-I down-regulation identifies a temporally regulated switch in Nef action.

Jimmy D Dikeakos, Katelyn M Atkins, Laurel Thomas, Lori Emert-Sedlak, In-Ja L Byeon, Jinwon Jung, Jinwoo Ahn, Matthew D Wortman, Ben Kukull, Masumichi Saito and 9 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 67 citations in OpenAlex.

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  13. Host and Viral Factors Influencing Interplay between the Macrophage and HIV-1.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Jimmy D DikeakosVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Katelyn M Atkins
Laurel Thomas
Lori Emert-Sedlak
In-Ja L Byeon
Jinwon Jung
Jinwoo Ahn
Matthew D Wortman
Ben Kukull
Masumichi Saito
Hirokazu Koizumi
Danielle M Williamson
Masateru Hiyoshi
Eric Barklis
Masafumi Takiguchi
Shinya Suzu
Angela M Gronenborn
Thomas E Smithgall
Gary Thomas
University of Pittsburgh · USVollum Institute · USKumamoto University · JPOregon Health & Science University · USJohns Hopkins University Center for AIDS ResearchUniversity of Cincinnati · US

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
In Vitro Analysis of HIV Gag Protein InteractionsR01GM060170 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARKLIS, ERIC W · 1999 to 2019
$5.9M
Small Molecule Inhibitors of HIV Nef SignalingR01AI057083 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SMITHGALL, THOMAS E. · 2003 to 2019
$5.1M
Program in Molecular and Cellular BiosciencesT32GM071338 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MASLEN, CHERYL L · 2005 to 2020
$3.5M
Role of PACS proteins in polycystin-2 trafficking and ADPKDR01DK037274 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI THOMAS, GARY · 1986 to 2010
$3.3M
HIV-1 Gag Precursor Protein InteractionsR01AI152579 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARKLIS, ERIC W · 2020 to 2024
$2.5M
SRC FAMILY KINASES AS MOLECULAR TARGETS FOR HIV NEFR01CA081398 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SMITHGALL, THOMAS E. · 1998 to 2010
$1.8M
Development of a high throughput HIV assembly screenR01AI071798 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARKLIS, ERIC W · 2007 to 2010
$1.5M
CIHR HFE-87760NCI NIH HHS CA81398NCI NIH HHS R01 CA081398NIAID NIH HHS AI071798NIAID NIH HHS AI14149NIAID NIH HHS AI57083NIAID NIH HHS R01 AI057083NIAID NIH HHS R01 AI071798NIAID NIH HHS R01 AI152579NIDDK NIH HHS DK37274NIDDK NIH HHS R01 DK037274NIGMS NIH HHS GM060170NIGMS NIH HHS GM82251NIGMS NIH HHS P50 GM082251NIGMS NIH HHS P50GM082251NIGMS NIH HHS R01 GM060170NIGMS NIH HHS T32 GM071338NIGMS NIH HHS T32 GM71338
6 · The paper itself

Abstract

HIV-1 Nef triggers down-regulation of cell-surface MHC-I by assembling a Src family kinase (SFK)-ZAP-70/Syk-PI3K cascade. Here, we report that chemical disruption of the Nef-SFK interaction with the small molecule inhibitor 2c blocks assembly of the multi-kinase complex and represses HIV-1-mediated MHC-I down-regulation in primary CD4(+) T-cells. 2c did not interfere with the PACS-2-dependent trafficking of Nef required for the Nef-SFK interaction or the AP-1 and PACS-1-dependent sequestering of internalized MHC-I, suggesting the inhibitor specifically interfered with the Nef-SFK interaction required for triggering MHC-I down-regulation. Transport studies revealed Nef directs a highly regulated program to down-regulate MHC-I in primary CD4(+) T-cells. During the first two days after infection, Nef assembles the 2c-sensitive multi-kinase complex to trigger down-regulation of cell-surface MHC-I. By three days postinfection Nef switches to a stoichiometric mode that prevents surface delivery of newly synthesized MHC-I. Pharmacologic inhibition of the multi-kinase cascade prevents the Nef-dependent block in MHC-I transport, suggesting the signaling and stoichiometric modes are causally linked. Together, these studies resolve the seemingly controversial models that describe Nef-induced MHC-I down-regulation and provide new insights into the mechanism of Nef action.

Indexed as

CD4-Positive T-LymphocytesCell LineDown-RegulationEndocytosisHistocompatibility Antigens Class IHIV-1HumansMultienzyme Complexesnef Gene Products, Human Immunodeficiency VirusPhosphatidylinositol 3-KinasesProtein BindingProtein TransportPTEN PhosphohydrolaseSignal TransductionSmall Molecule Librariessrc-Family KinasesHistocompatibility Antigens Class IMultienzyme Complexesnef Gene Products, Human Immunodeficiency VirusPACS1 protein, humanPhosphatidylinositol 3-KinasesPTEN PhosphohydrolasePTEN protein, humanSmall Molecule Librariessrc-Family KinasesTranscription Factor AP-1Vesicular Transport Proteins

Identifiers

PMID20702582
PMCPMC2947465
OpenAlexW2042556347

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.