Evidence map›Paper›PMID 20699412›Full record

ArticleDrug metabolism and disposition: the biological fate of chemicals2010

CYP2C8 exists as a dimer in natural membranes.

Gang Hu, Eric F Johnson, Byron Kemper

Open access · bronzeAbstract read
In one paragraph

Article in Drug metabolism and disposition: the biological fate of chemicals, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Domain-Swap Dimerization ofMolecular pharmacology · 2020
    Article
  7. The Biosynthesis of Enzymatically Oxidized Lipids.Frontiers in endocrinology · 2020
    Review
  8. Targeting Kinases inFrontiers in veterinary science · 2020
    Article
  9. Critical Differences between Enzyme Sources in Sensitivity to Detect Time-Dependent Inactivation of CYP2C8.Drug metabolism and disposition: the biological fate of chemicals · 2019
    Article
  10. Article
  11. Article
  12. Review
  13. Immobilized Cytochrome P450 for Monitoring of P450-P450 Interactions and Metabolism.Drug metabolism and disposition: the biological fate of chemicals · 2016
    Article
  14. Article
  15. Article
  16. Article
  17. Correlating structure and function of drug-metabolizing enzymes: progress and ongoing challenges.Drug metabolism and disposition: the biological fate of chemicals · 2014
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Gang HuDepartment of Molecular and Integrative Physiology and the College of Medicine, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Eric F Johnson
Byron Kemper
Laboratoire d’immunologie intégrative du cancer · FRScripps Research Institute · US

Funding

CYTOCHROME P450 POLYMORPHISMR01GM031001 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI JOHNSON, ERIC F · 1985 to 2022
$16.2M
STRUCTURAL DETERMINANTS OF FUNCTIONAL CYTOCHROMES P450R01GM035897 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KEMPER, BYRON W · 1986 to 2009
$2.3M
NIGMS NIH HHS GM031001NIGMS NIH HHS GM035897NIGMS NIH HHS R01 GM031001NIGMS NIH HHS R01 GM035897
6 · The paper itself

Abstract

CYP2C8 with a modified N-terminal sequence (2C8H) crystallizes as a dimer, but it is not known whether native CYP2C8 exists as a dimer in natural membranes. We have examined the organization of 2C8H and CYP2C8 expressed in bacterial membranes and mammalian endoplasmic reticulum membranes, respectively, by cysteine scanning and cross-linking or oxidation of sulfhydryl groups. In both forms of CYP2C8, cross-linked dimers were observed that were eliminated by mutation of Cys-24 in the linker region. Introduction of individual cysteines in the N-terminal 21-amino acid membrane-spanning signal anchor resulted in a pattern of cross-linking consistent with an α-helical structure for the signal anchor. In the linker region, cross-linking was observed for cysteine substituted at residues 22, 23, or 24, just before three Arg residues, indicating close apposition of the two linker sequences despite the neighboring positive charges. Introduction into the F-G loop region of cysteine pairs optimally located for cross-linking based on the crystal structure resulted in cross-linked dimers in the Cys-24 mutant. Deletion of the signal anchor sequence eliminated cross-linking mediated by Cys-24 or by cysteines introduced in the F-G loop regions, indicating that the signal anchor interaction is required for stable dimer formation. These results indicate that the signal anchor sequence and the F-G loop region form interfaces for CYP2C8 intermolecular interactions in natural membranes.

Indexed as

Protein MultimerizationAmino Acid SequenceAryl Hydrocarbon HydroxylasesBinding SitesCell LineCross-Linking ReagentsCysteineCytochrome P-450 CYP2C8Electrophoresis, Polyacrylamide GelEndoplasmic ReticulumEscherichia coliHumansIntracellular MembranesMaleimidesModels, MolecularMolecular Sequence DataAryl Hydrocarbon HydroxylasesCross-Linking ReagentsCYP2C8 protein, humanCysteineCytochrome P-450 CYP2C8maleimideMaleimides

Identifiers

PMID20699412
PMCPMC2967391
OpenAlexW2145392467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.