Evidence map›Paper›PMID 20696584›Full record

ArticleBioorganic & medicinal chemistry2010

Modulation of the inhibitor properties of dipeptidyl (acyloxy)methyl ketones toward the CaaX proteases.

Anne-Marie R Dechert, James P MacNamara, Sarah R Breevoort, Emily R Hildebrandt, Ned W Hembree, Adam C Rea, Duncan E McLain, Stephen B Porter, Walter K Schmidt, Timothy M Dore

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Rce1: mechanism and inhibition.Critical reviews in biochemistry and molecular biology · 2018
    Review
  2. Article
  3. Targeting RAS Membrane Association: Back to the Future for Anti-RAS Drug Discovery?Clinical cancer research : an official journal of the American Association for Cancer Research · 2015
    Review
  4. Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Anne-Marie R DechertDepartment of Chemistry, University of Georgia, Athens, GA 30602-2556, USA.
James P MacNamara
Sarah R Breevoort
Emily R Hildebrandt
Ned W Hembree
Adam C Rea
Duncan E McLain
Stephen B Porter
Walter K Schmidt
Timothy M Dore
University of Georgia · US

Funding

Role of Rce1p in the Biogenesis of CaaX ProteinsR01GM067092 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI SCHMIDT, WALTER K · 2005 to 2009
$1.2M
NIGMS NIH HHS GM067092NIGMS NIH HHS R01 GM067092
6 · The paper itself

Abstract

Dipeptidyl (acyloxy)methyl ketones (AOMKs) have been identified as mechanism-based inhibitors of certain cysteine proteases. These compounds are also inhibitors of the integral membrane proteins Rce1p and Ste24p, which are proteases that independently mediate a cleavage step associated with the maturation of certain isoprenylated proteins. The enzymatic mechanism of Rce1p is ill-defined, whereas Ste24p is a zinc metalloprotease. Rce1p is required for the proper processing of the oncoprotein Ras and is viewed as a potential target for cancer therapy. In this study, we synthesized a small library of dipeptidyl AOMKs to investigate the structural elements that contribute to the inhibitor properties of this class of molecules toward Rce1p and Ste24p. The compounds were evaluated using a fluorescence-based in vitro proteolysis assay. The most potent dipeptidyl AOMKs contained an arginine residue and the identity of the benzoate group strongly influenced potency. A 'warhead' free AOMK inhibited Rce1p and Ste24p. The data suggest that the dipeptidyl AOMKs are not mechanism-based inhibitors of Rce1p and Ste24p and corroborate the hypothesis that Rce1p is not a cysteine protease.

Indexed as

Antineoplastic AgentsCysteine ProteasesDipeptidesDrug Screening Assays, AntitumorKetonesMembrane ProteinsMetalloendopeptidasesProprotein ConvertasesProtease InhibitorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSubstrate SpecificityAntineoplastic AgentsCysteine ProteasesDipeptidesKetonesMembrane ProteinsMetalloendopeptidasesProprotein ConvertasesProtease InhibitorsRCE1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSTE24 protein, S cerevisiae

Identifiers

PMID20696584
PMCPMC2932464
OpenAlexW2079677855

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.