Evidence map›Paper›PMID 20696128›Full record

ArticleBiochimica et biophysica acta2010

Simulations of calcium channel block by trivalent cations: Gd(3+) competes with permeant ions for the selectivity filter.

Attila Malasics, Dezso Boda, Mónika Valiskó, Douglas Henderson, Dirk Gillespie

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In one paragraph

Article in Biochimica et biophysica acta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Attila MalasicsDepartment of Physical Chemistry, University of Pannonia, Veszprém, Hungary.
Dezso Boda
Mónika Valiskó
Douglas Henderson
Dirk Gillespie
Brigham Young University · USUniversity of Pannonia · HURush University Medical Center · US

Funding

Skeletal Muscle Ryanodine Receptor Permeation and Self Counter-Ion FlowR01AR054098 · NIAMS · RUSH UNIVERSITY MEDICAL CENTER · PI FILL, MICHAEL · 2007 to 2017
$2.9M
Control of IP3R-Mediated Calcium ReleaseR01GM111397 · NIGMS · RUSH UNIVERSITY MEDICAL CENTER · PI CHEN, SUI RONG WAYNE, FILL, MICHAEL · 2015 to 2018
$1.6M
Simulations of Calcium Selectivity and BindingR01GM076013 · NIGMS · RUSH UNIVERSITY MEDICAL CENTER · PI EISENBERG, ROBERT S. · 2006 to 2009
$1.5M
NIAMS NIH HHS R01 AR054098NIGMS NIH HHS GM076013NIGMS NIH HHS R01 GM076013
6 · The paper itself

Abstract

Current through L-type calcium channels (Ca(V)1.2 or dihydropyridine receptor) can be blocked by micromolar concentrations of trivalent cations like the lanthanide gadolinium (Gd(3+)). It has been proposed that trivalent block is due to ions competing for a binding site in both the open and closed configuration, but possibly with different trivalent affinities. Here, we corroborate this general view of trivalent block by computing conductance of a model L-type calcium channel. The model qualitatively reproduces the Gd(3+) concentration dependence and the effect that substantially more Gd(3+) is required to produce similar block in the presence of Sr(2+) (compared to Ba(2+)) and even more in the presence of Ca(2+). Trivalent block is explained in this model by cations binding in the selectivity filter with the charge/space competition mechanism. This is the same mechanism that in the model channel governs other selectivity properties. Specifically, selectivity is determined by the combination of ions that most effectively screen the negative glutamates of the protein while finding space in the midst of the closely packed carboxylate groups of the glutamate residues.

Indexed as

BariumCalciumCalcium Channel BlockersCalcium Channels, L-TypeGadoliniumBariumCalciumCalcium Channel BlockersCalcium Channels, L-TypeGadolinium

Identifiers

PMID20696128
PMCPMC2946232
OpenAlexW2054966786

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.