Evidence map›Paper›PMID 20694148›Full record

ArticlePloS one2010

A genome-wide association study of the metabolic syndrome in Indian Asian men.

Delilah Zabaneh, David J Balding

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 8 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 8 syntheses or guidelines pooled it, 145 citations in OpenAlex.

  1. Pooled it
  2. Four pleiotropic loci associated with fat mass and lean mass.International journal of obesity (2005) · 2020
    Pooled it
  3. Pooled it
  4. Pleiotropic genes for metabolic syndrome and inflammation.Molecular genetics and metabolism · 2014
    Pooled it
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  18. Precision medicine and metabolic syndrome.ARYA atherosclerosis · 2022
    Review
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  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Delilah ZabanehDepartment of Epidemiology and Public Health, Imperial College London, London, UK. d.zabaneh@ucl.ac.uk
David J Balding
Imperial College London · GB

Funding

British Heart Foundation SP/04/02
6 · The paper itself

Abstract

We conducted a two-stage genome-wide association study to identify common genetic variation altering risk of the metabolic syndrome and related phenotypes in Indian Asian men, who have a high prevalence of these conditions. In Stage 1, approximately 317,000 single nucleotide polymorphisms were genotyped in 2700 individuals, from which 1500 SNPs were selected to be genotyped in a further 2300 individuals. Selection for inclusion in Stage 1 was based on four metabolic syndrome component traits: HDL-cholesterol, plasma glucose and Type 2 diabetes, abdominal obesity measured by waist to hip ratio, and diastolic blood pressure. Association was tested with these four traits and a composite metabolic syndrome phenotype. Four SNPs reaching significance level p<5x10(-7) and with posterior probability of association >0.8 were found in genes CETP and LPL, associated with HDL-cholesterol. These associations have already been reported in Indian Asians and in Europeans. Five additional loci harboured SNPs significant at p<10(-6) and posterior probability >0.5 for HDL-cholesterol, type 2 diabetes or diastolic blood pressure. Our results suggest that the primary genetic determinants of metabolic syndrome are the same in Indian Asians as in other populations, despite the higher prevalence. Further, we found little evidence of a common genetic basis for metabolic syndrome traits in our sample of Indian Asian men.

Indexed as

AdultAgedAsian PeopleBlood PressureCholesterol, HDLDiabetes Mellitus, Type 2Genetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansIndiaLinkage DisequilibriumMaleMetabolic SyndromeMiddle AgedModels, GeneticCholesterol, HDL

Identifiers

PMID20694148
PMCPMC2915922
OpenAlexW2087996699

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.