Evidence map›Paper›PMID 20693816›Full record

ArticleNephron. Experimental nephrology2011

Differential expression of renal proteins in a rodent model of Meckel syndrome.

Stephen B Mason, Xianyin Lai, Heather N Ringham, Robert L Bacallao, Peter C Harris, Frank A Witzmann, Vincent H Gattone

Open access · bronzeAbstract read
In one paragraph

Article in Nephron. Experimental nephrology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Stephen B MasonDepartment of Anatomy and Cell Biology, Indiana University School of Medicine, Indianapolis, USA.
Xianyin Lai
Heather N Ringham
Robert L Bacallao
Peter C Harris
Frank A Witzmann
Vincent H Gattone
Laboratoire d’immunologie intégrative du cancer · FRInstitute of Cell Biology and Neurobiology · ITIndiana University School of MedicineWinnMed · US

Funding

Pathogenesis of wpk-induced Renal and Cerebral DiseaseR01DK068581 · NIDDK · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI GATTONE, VINCENT H · 2006 to 2008
$821k
NIDDK NIH HHS R01 DK068581NIDDK NIH HHS R01 DK68581
6 · The paper itself

Abstract

backgroundMeckel syndrome (MKS) is a fatal autosomal recessive condition with prominent renal cystic pathology. Renal protein misexpression was evaluated in the Wpk rat model of human MKS3 gene disease to identify biomarkers for the staging of renal cystic progression.

methodsMisexpressed proteins were compared between early and late stages of MKS renal cystic disease using proteomic analysis (two-dimensional gel electrophoresis with LC-MS/MS identification) followed by Western blot analysis.

resultsA proteomic analysis identified 76 proteins with statistically different, normalized abundance in at least one group. Subsequently, Western blot was used to confirm differential expression in several of these and polycystic kidney disease (PKD)-associated proteins. Galectin-1 and vimentin were identified as overexpressed proteins, which have been previously found in the jck mouse model of nephronophthisis 9. Ciliopathic PKD proteins, polycystins 1 & 2, and fibrocystin were also differentially expressed in Wpk kidney.

conclusionIn the Wpk rat, misexpressed proteins were identified that were also implicated in other forms of cystic disease. Numerous proteins were either over- or underexpressed in late-stage disease. Differences in protein expression may serve as biomarkers of cystic disease and its progression.

Indexed as

AnimalsBlotting, WesternCiliary Motility DisordersDisease Models, AnimalElectrophoresis, Gel, Two-DimensionalEncephaloceleFatty Acid Binding Protein 3Fatty Acid-Binding ProteinsFemaleGalectinsHumansKidneyLamininMaleMicePolycystic Kidney DiseasesFABP3 protein, ratFatty Acid Binding Protein 3Fatty Acid-Binding ProteinsGalectinsLamininPKHD1 protein, ratProteomeReceptors, Cell SurfaceTRPP Cation ChannelsVimentin

Identifiers

PMID20693816
PMCPMC3214820
OpenAlexW2021054046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.