ArticlePloS one2010
Global analyses of small interfering RNAs derived from Bamboo mosaic virus and its associated satellite RNAs in different plants.
Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed, 44 citations in OpenAlex.
- Mixed viral infections uncover multifaceted RNA silencing strategies in plant antiviral defense.BMC genomics · 2026Article
- Importin α2 participates in RNA interference against bamboo mosaic virus accumulation in Nicotiana benthamiana via NbAGO10a-mediated small RNA clearance.Molecular plant pathology · 2024Article
- First Report of DistinctViruses · 2022Article
- MiR398-regulated antioxidants contribute to Bamboo mosaic virus accumulation and symptom manifestation.Plant physiology · 2022Article
- Genome-wide analysis of small RNAs from Odontoglossum ringspot virus and Cymbidium mosaic virus synergistically infecting Phalaenopsis.Molecular plant pathology · 2020Article
- Dual resistance of transgenic plants against Cymbidium mosaic virus and Odontoglossum ringspot virus.Scientific reports · 2019Article
- Abscisic Acid Induces Resistance againstPlant physiology · 2017Article
- Interfering Satellite RNAs ofFrontiers in microbiology · 2017Review
- Article
- Comparative analysis of virus-derived small RNAs within cassava (Manihot esculenta Crantz) infected with cassava brown streak viruses.Virus research · 2016Article
- A transgenic plant cell-suspension system for expression of epitopes on chimeric Bamboo mosaic virus particles.Plant biotechnology journal · 2016Article
- Next-Generation Sequencing and Genome Editing in Plant Virology.Frontiers in microbiology · 2016Review
- The Tomato Spotted Wilt Virus Genome Is Processed Differentially in its Plant Host Arachis hypogaea and its Thrips Vector Frankliniella fusca.Frontiers in plant science · 2016Article
- Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems.BMC genomics · 2015Article
- Article
- Historical perspective, development and applications of next-generation sequencing in plant virology.Viruses · 2014Review
- Exploitation of natural genetic diversity to study plant-virus interactions: what can we learn from Arabidopsis thaliana?Molecular plant pathology · 2013Review
- Transgenic resistance to Bamboo mosaic virus by expression of interfering satellite RNA.Molecular plant pathology · 2013Article
- Differential expression of tomato spotted wilt virus-derived viral small RNAs in infected commercial and experimental host plants.PloS one · 2013Article
- The conserved 5' apical hairpin stem loops of bamboo mosaic virus and its satellite RNA contribute to replication competence.Nucleic acids research · 2012Article
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Authors and funding
9 authors at 6 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundSatellite RNAs (satRNAs), virus parasites, are exclusively associated with plant virus infection and have attracted much interest over the last 3 decades. Upon virus infection, virus-specific small interfering RNAs (vsiRNAs) are produced by dicer-like (DCL) endoribonucleases for anti-viral defense. The composition of vsiRNAs has been studied extensively; however, studies of satRNA-derived siRNAs (satsiRNAs) or siRNA profiles after satRNA co-infection are limited. Here, we report on the small RNA profiles associated with infection with Bamboo mosaic virus (BaMV) and its two satellite RNAs (satBaMVs) in Nicotiana benthamiana and Arabidopsis thaliana. METHODOLOGY/PRINCIPAL
findingsLeaves of N. benthamiana or A. thaliana inoculated with water, BaMV alone or co-inoculated with interfering or noninterfering satBaMV were collected for RNA extraction, then large-scale Solexa sequencing. Up to about 20% of total siRNAs as BaMV-specific siRNAs were accumulated in highly susceptible N. benthamiana leaves inoculated with BaMV alone or co-inoculated with noninterfering satBaMV; however, only about 0.1% of vsiRNAs were produced in plants co-infected with interfering satBaMV. The abundant region of siRNA distribution along BaMV and satBaMV genomes differed by host but not by co-infection with satBaMV. Most of the BaMV and satBaMV siRNAs were 21 or 22 nt, of both (+) and (-) polarities; however, a higher proportion of 22-nt BaMV and satBaMV siRNAs were generated in N. benthamiana than in A. thaliana. Furthermore, the proportion of non-viral 24-nt siRNAs was greatly increased in N. benthamiana after virus infection. CONCLUSIONS/SIGNIFICANCE: The overall composition of vsiRNAs and satsiRNAs in the infected plants reflect the combined action of virus, satRNA and different DCLs in host plants. Our findings suggest that the structure and/or sequence demands of various DCLs in different hosts may result in differential susceptibility to the same virus. DCL2 producing 24-nt siRNAs under biotic stresses may play a vital role in the antiviral mechanism in N. benthamiana.
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