Evidence map›Paper›PMID 20689043›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Structure and mechanism of proton transport through the transmembrane tetrameric M2 protein bundle of the influenza A virus.

Rudresh Acharya, Vincenzo Carnevale, Giacomo Fiorin, Benjamin G Levine, Alexei L Polishchuk, Victoria Balannik, Ilan Samish, Robert A Lamb, Lawrence H Pinto, William F DeGrado and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 180 papers.

0numbers the graph read from it
0cells of the map it votes in
180citing papers in PubMed
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

180 citing papers in PubMed, 262 citations in OpenAlex.

  1. Article
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  3. Cavity acidification limits ferritin iron biomineralization.Journal of inorganic biochemistry · 2026
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  11. Solid-State NMR of Virus Membrane Proteins.Accounts of chemical research · 2025
    Article
  12. Article
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  14. Activation of the influenza B M2 proton channel (BM2).bioRxiv : the preprint server for biology · 2024
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

120 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Rudresh AcharyaDepartment of Biochemistry and Biophysics, School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059.
Vincenzo Carnevale
Giacomo Fiorin
Benjamin G Levine
Alexei L Polishchuk
Victoria Balannik
Ilan Samish
Robert A Lamb
Lawrence H Pinto
William F DeGrado
Michael L Klein
Temple University · USUniversity of Pennsylvania · USNorthwestern University · US

Funding

Development of drugs that target the M2 proton channel from the influenza A VirusU01AI074571 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2008 to 2012
$7.5M
Structure of M2 Proton Channel from Influenza A VirusR01GM056423 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 1997 to 2016
$4.5M
The Structure and Function of the Influenza Virus GenomeR01AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1985 to 2016
$2.8M
STRUCTURE/FUNCTION OF THE INFLUENZA VIRUS GENOMER37AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1987 to 2006
$1.8M
The Structure and Function of the Influenza Virus GenomeR56AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 2011 to 2011
$369k
Howard Hughes Medical InstituteNIAID NIH HHS AI 20201NIAID NIH HHS AI 74571NIAID NIH HHS R01 AI020201NIAID NIH HHS R37 AI020201NIAID NIH HHS R56 AI020201NIAID NIH HHS U01 AI074571NIGMS NIH HHS GM56423NIGMS NIH HHS R01 GM056423
6 · The paper itself

Abstract

The M2 proton channel from influenza A virus is an essential protein that mediates transport of protons across the viral envelope. This protein has a single transmembrane helix, which tetramerizes into the active channel. At the heart of the conduction mechanism is the exchange of protons between the His37 imidazole moieties of M2 and waters confined to the M2 bundle interior. Protons are conducted as the total charge of the four His37 side chains passes through 2(+) and 3(+) with a pK(a) near 6. A 1.65 A resolution X-ray structure of the transmembrane protein (residues 25-46), crystallized at pH 6.5, reveals a pore that is lined by alternating layers of sidechains and well-ordered water clusters, which offer a pathway for proton conduction. The His37 residues form a box-like structure, bounded on either side by water clusters with well-ordered oxygen atoms at close distance. The conformation of the protein, which is intermediate between structures previously solved at higher and lower pH, suggests a mechanism by which conformational changes might facilitate asymmetric diffusion through the channel in the presence of a proton gradient. Moreover, protons diffusing through the channel need not be localized to a single His37 imidazole, but instead may be delocalized over the entire His-box and associated water clusters. Thus, the new crystal structure provides a possible unification of the discrete site versus continuum conduction models.

Indexed as

Amino Acid SequenceAnimalsBiophysical PhenomenaCrystallography, X-RayFemaleHistidineHydrogen-Ion ConcentrationInfluenza A virusIn Vitro TechniquesIon ChannelsIon TransportModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedMutant ProteinsOocytesHistidineIon ChannelsM2 protein, Influenza A virusMutant ProteinsProtonsRecombinant ProteinsViral Matrix ProteinsViroporin Proteins

Identifiers

PMID20689043
PMCPMC2930543
OpenAlexW1989764838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.