Evidence map›Paper›PMID 20688979›Full record

ArticlePlant physiology2010

Characterization of a developmental root response caused by external ammonium supply in Lotus japonicus.

Alessandra Rogato, Enrica D'Apuzzo, Ani Barbulova, Selim Omrane, Aurora Parlati, Simona Carfagna, Alex Costa, Fiorella Lo Schiavo, Sergio Esposito, Maurizio Chiurazzi

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 70 citations in OpenAlex.

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  9. TheInternational journal of molecular sciences · 2021
    Article
  10. Review
  11. Root Biomass Distribution ofFrontiers in plant science · 2021
    Article
  12. Article
  13. Function and Regulation of Ammonium Transporters in Plants.International journal of molecular sciences · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Alessandra RogatoInstitute of Genetics and Biophysics, Naples, Italy.
Enrica D'Apuzzo
Ani Barbulova
Selim Omrane
Aurora Parlati
Simona Carfagna
Alex Costa
Fiorella Lo Schiavo
Sergio Esposito
Maurizio Chiurazzi
University of Naples Federico II · ITUniversity of Padua · ITInstitute of Genetics and Biophysics · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants respond to changes of nutrient availability in the soil by modulating their root system developmental plan. This response is mediated by systemic changes of the nutritional status and/or by local perception of specific signals. The effect of nitrate on Arabidopsis (Arabidopsis thaliana) root development represents a paradigm of these responses, and nitrate transporters are involved both in local and systemic control. Ammonium (NH(4)(+)) represents an important nitrogen (N) source for plants, although toxicity symptoms are often associated with high NH(4)(+) concentration when this is present as the only N source. The reason for these effects is still controversial, and mechanisms associating ammonium supply and plant developmental programs are completely unknown. We determined in Lotus japonicus the range of ammonium concentration that significantly inhibits the elongation of primary and lateral roots without affecting the biomass of the shoot. The comparison of the growth phenotypes in different N conditions indicated the specificity of the ammonium effect, suggesting that this was not mediated by assimilatory negative feedback mechanisms. In the range of inhibitory NH(4)(+) conditions, only the LjAMT1;3 gene, among the members of the LjAMT1 family, showed a strong increased transcription that was reflected by an enlarged topology of expression. Remarkably, the short-root phenotype was phenocopied in transgenic lines by LjAMT1;3 overexpression independently of ammonium supply, and the same phenotype was not induced by another AMT1 member. These data describe a new plant mechanism to cope with environmental changes, giving preliminary information on putative actors involved in this specific ammonium-induced response.

Indexed as

Amino AcidsBiomassGene Expression Regulation, PlantLotusPhenotypePlant RootsPlants, Genetically ModifiedPlant ShootsQuaternary Ammonium CompoundsTranscription, GeneticAmino AcidsQuaternary Ammonium Compounds

Identifiers

PMID20688979
PMCPMC2948985
OpenAlexW2019046099

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.