Evidence map›Paper›PMID 20687218›Full record

ArticleThe Prostate2010

Vitamin D pathway gene variants and prostate cancer prognosis.

Sarah K Holt, Erika M Kwon, Joseph S Koopmeiners, Daniel W Lin, Ziding Feng, Elaine A Ostrander, Ulrike Peters, Janet L Stanford

Abstract read
In one paragraph

Article in The Prostate, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 3 pooled it
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 3 syntheses or guidelines pooled it, 89 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Trial
  6. Article
  7. Article
  8. The double disparity: Vitamin D deficiency and lethal prostate cancer in black men.The Journal of steroid biochemistry and molecular biology · 2025
    Review
  9. Article
  10. Article
  11. Observational
  12. Article
  13. Review
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  15. Article
  16. The Epidemiology of Prostate Cancer.Cold Spring Harbor perspectives in medicine · 2018
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sarah K HoltDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA. skholt@fhcrc.org
Erika M Kwon
Joseph S Koopmeiners
Daniel W Lin
Ziding Feng
Elaine A Ostrander
Ulrike Peters
Janet L Stanford
Fred Hutch Cancer Center · USNational Human Genome Research Institute · USVA Puget Sound Health Care System · US

Funding

TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI John Kyung Lee · 2002 to 2026
$58.1M
Finding Genes for Human Prostate CancerZIAHG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2009 to 2021
$17.7M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
NSAIDS and Other Medications in Prostate Cancer EtiologyR01CA092579 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2001 to 2005
$3.2M
GENETIC POLYMORPHISMS AND PROSTATE CANCER RISKR01CA082664 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1999 to 2001
$350k
Plasma Vitamin D Levels and Prostate Cancer OutcomesR03CA153111 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 2010 to 2011
$173k
PROSTATE CANCER IN RELATION TO VASECTOMYR01CA056678 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1993 to 1997
–
NCI NIH HHS P50 CA097186NCI NIH HHS P50-CA097186NCI NIH HHS R01 CA056678NCI NIH HHS R01-CA056678NCI NIH HHS R01-CA082664NCI NIH HHS R01 CA092579NCI NIH HHS R01-CA092579NCI NIH HHS R03 CA153111NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

backgroundObservational studies linking vitamin D deficiency with increased prostate cancer (PCa) mortality and the pleiotropic anticancer effects of vitamin D in malignant prostate cell lines have initiated trials examining potential therapeutic benefits of vitamin D metabolites. There have been some successes but efforts have been hindered by risk of inducing hypercalcemia. A limited number of studies have investigated associations between variants in vitamin D pathway genes with aggressive forms of PCa. Increased understanding of relevant germline genetic variation with disease outcome could aid in the development of vitamin-D-based therapies.

methodsWe undertook a comprehensive analysis of 48 tagging single-nucleotide polymorphisms (tagSNPs) in genes encoding for vitamin D receptor (VDR), vitamin D activating enzyme 1-alpha-hydroxylase (CYP27B1), and deactivating enzyme 24-hydroxylase (CYP24A1) in a cohort of 1,294 Caucasian cases with an average of 8 years of follow-up. Disease recurrence/progression and PCa-specific mortality risks were estimated using adjusted Cox proportional hazards regression.

resultsThere were 139 cases with recurrence/progression events and 57 cases who died of PCa. Significantly altered risks of recurrence/progression were observed in relation to genotype for two VDR tagSNPs (rs6823 and rs2071358) and two CYP24A1 tagSNPs (rs927650 and rs2762939). Three VDR tagSNPs (rs3782905, rs7299460, and rs11168314), one CYP27B1 tagSNP (rs3782130), and five CYP24A1 tagSNPs (rs3787557, rs4809960, rs2296241, rs2585428, and rs6022999) significantly altered risks of PCa death.

conclusionsGenetic variations in vitamin D pathway genes were found to alter both risk of recurrence/progression and PCa-specific mortality.

Indexed as

25-Hydroxyvitamin D3 1-alpha-HydroxylaseAllelesCase-Control StudiesDisease ProgressionGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansMalePolymorphism, Single NucleotidePrognosisProportional Hazards ModelsProstatic NeoplasmsReceptors, CalcitriolROC Curve25-Hydroxyvitamin D3 1-alpha-HydroxylaseCYP24A1 protein, humanReceptors, CalcitriolSteroid HydroxylasesVitamin D3 24-Hydroxylase

Identifiers

PMID20687218
PMCPMC2927712
OpenAlexW2074897460

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.