Biological, clinical and population relevance of 95 loci for blood lipids.
Tanya M Teslovich, Kiran Musunuru, Albert V Smith, Andrew C Edmondson, Ioannis M Stylianou, Masahiro Koseki, James P Pirruccello, Samuli Ripatti, Daniel I Chasman, Cristen J Willer and 199 more
Synthesis in Nature, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2,124 papers, 7 of them syntheses that pooled it.
0numbers the graph read from it
0cells of the map it votes in
2,124citing papers in PubMed, 7 pooled it
173.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registry
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
3 · Its place in the literature
Who cites it
2,124 citing papers in PubMed, 7 syntheses or guidelines pooled it, 3,661 citations in OpenAlex.
Tanya M TeslovichCenter for Statistical Genetics, Department of Biostatistics, University of Michigan, Ann Arbor, Michigan 48109, USA.
Kiran Musunuru
Albert V Smith
Andrew C Edmondson
Ioannis M Stylianou
Masahiro Koseki
James P Pirruccello
Samuli Ripatti
Daniel I Chasman
Cristen J Willer
Christopher T Johansen
Sigrid W Fouchier
Aaron Isaacs
Gina M Peloso
Maja Barbalic
Sally L Ricketts
Joshua C Bis
Yurii S Aulchenko
Gudmar Thorleifsson
Mary F Feitosa
John Chambers
Marju Orho-Melander
Olle Melander
Toby Johnson
Xiaohui Li
Xiuqing Guo
Mingyao Li
Yoon Shin Cho
Min Jin Go
Young Jin Kim
Jong-Young Lee
Taesung Park
Kyunga Kim
Xueling Sim
Rick Twee-Hee Ong
Damien C Croteau-Chonka
Leslie A Lange
Joshua D Smith
Kijoung Song
Jing Hua Zhao
Xin Yuan
Jian'an Luan
Claudia Lamina
Andreas Ziegler
Weihua Zhang
Robert Y L Zee
Alan F Wright
Jacqueline C M Witteman
James F Wilson
Gonneke Willemsen
H-Erich Wichmann
John B Whitfield
Dawn M Waterworth
Nicholas J Wareham
Gérard Waeber
Peter Vollenweider
Benjamin F Voight
Veronique Vitart
Andre G Uitterlinden
Manuela Uda
Jaakko Tuomilehto
John R Thompson
Toshiko Tanaka
Ida Surakka
Heather M Stringham
Tim D Spector
Nicole Soranzo
Johannes H Smit
Juha Sinisalo
Kaisa Silander
Eric J G Sijbrands
Angelo Scuteri
James Scott
David Schlessinger
Serena Sanna
Veikko Salomaa
Juha Saharinen
Chiara Sabatti
Aimo Ruokonen
Igor Rudan
Lynda M Rose
Robert Roberts
Mark Rieder
Bruce M Psaty
Peter P Pramstaller
Irene Pichler
Markus Perola
Brenda W J H Penninx
Nancy L Pedersen
Cristian Pattaro
Alex N Parker
Guillaume Pare
Ben A Oostra
Christopher J O'Donnell
Markku S Nieminen
Deborah A Nickerson
Grant W Montgomery
Thomas Meitinger
Ruth McPherson
Mark I McCarthy
Wendy McArdle
David Masson
Nicholas G Martin
Fabio Marroni
Massimo Mangino
Patrik K E Magnusson
Gavin Lucas
Robert Luben
Ruth J F Loos
Marja-Liisa Lokki
Guillaume Lettre
Claudia Langenberg
Lenore J Launer
Edward G Lakatta
Reijo Laaksonen
Kirsten O Kyvik
Florian Kronenberg
Inke R König
Kay-Tee Khaw
Jaakko Kaprio
Lee M Kaplan
Asa Johansson
Marjo-Riitta Jarvelin
A Cecile J W Janssens
Erik Ingelsson
Wilmar Igl
G Kees Hovingh
Jouke-Jan Hottenga
Albert Hofman
Andrew A Hicks
Christian Hengstenberg
Iris M Heid
Caroline Hayward
Aki S Havulinna
Nicholas D Hastie
Tamara B Harris
Talin Haritunians
Alistair S Hall
Ulf Gyllensten
Candace Guiducci
Leif C Groop
Elena Gonzalez
Christian Gieger
Nelson B Freimer
Luigi Ferrucci
Jeanette Erdmann
Paul Elliott
Kenechi G Ejebe
Angela Döring
Anna F Dominiczak
Serkalem Demissie
Panagiotis Deloukas
Eco J C de Geus
Ulf de Faire
Gabriel Crawford
Francis S Collins
Yii-der I Chen
Mark J Caulfield
Harry Campbell
Noel P Burtt
Lori L Bonnycastle
Dorret I Boomsma
S Matthijs Boekholdt
Richard N Bergman
Inês Barroso
Stefania Bandinelli
Christie M Ballantyne
Themistocles L Assimes
Thomas Quertermous
David Altshuler
Mark Seielstad
Tien Y Wong
E-Shyong Tai
Alan B Feranil
Christopher W Kuzawa
Linda S Adair
Herman A Taylor
Ingrid B Borecki
Stacey B Gabriel
James G Wilson
Hilma Holm
Unnur Thorsteinsdottir
Vilmundur Gudnason
Ronald M Krauss
Karen L Mohlke
Jose M Ordovas
Patricia B Munroe
Jaspal S Kooner
Alan R Tall
Robert A Hegele
John J P Kastelein
Eric E Schadt
Jerome I Rotter
Eric Boerwinkle
David P Strachan
Vincent Mooser
Kari Stefansson
Muredach P Reilly
Nilesh J Samani
Heribert Schunkert
L Adrienne Cupples
Manjinder S Sandhu
Paul M Ridker
Daniel J Rader
Cornelia M van Duijn
Leena Peltonen
Gonçalo R Abecasis
Michael Boehnke
Sekar Kathiresan
Broad Institute · USErasmus MC · NLUniversity of Helsinki · FINational Institutes of Health · USAddenbrooke's Hospital · GBCedars-Sinai Medical Center · USTranslational Therapeutics (United States) · USUniversity of Michigan · USdeCODE Genetics (Iceland) · ISEurac Research · ITGlaxoSmithKline (United States) · USHelmholtz Zentrum München · DEImperial College London · GBInstitute of Genetics and Cancer · GBKarolinska Institutet · SEKorea National Institute of Health · KRUniversity of Cambridge · GBUniversity of Lübeck · DEUniversity of North Carolina at Chapel Hill · USUniversity of Washington · US
Funding
Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
ZONA-FREE HAMSTER OVA ASSAY AS AN INDICATOR OF MALE FERTILITYM01RR000425 · NCRR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI ANDERSON, GAIL V · 1985 to 2011
$74.2M
Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUSAN M. SMITH · 1999 to 2026
$31.6M
Women's Health Study: Continued Follow-upR01CA047988 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI BURING, JULIE E., LEE, I-MIN · 1991 to 2014
$28.2M
Building on GWAS for NHLBI-disease: the CHARGE consortiumRC2HL102419 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A. · 2009 to 2010
$27.6M
Pharmacogenomics and Risk of Cardiovascular DiseaseU01HL069757 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, RONALD M · 2001 to 2009
$24.7M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
University of Michigan Training Program in Genomic ScienceT32HG000040 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Sebastian Zoellner · 1995 to 2026
$16.4M
MULTIDISCIPLINARY RESEARCH TRAINING IN CARDIOLOGYT32HL007208 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI Patrick Thomas Ellinor, David E Sosnovik · 1985 to 2026
$16.1M
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6 · The paper itself
Abstract
Plasma concentrations of total cholesterol, low-density lipoprotein cholesterol, high-density lipoprotein cholesterol and triglycerides are among the most important risk factors for coronary artery disease (CAD) and are targets for therapeutic intervention. We screened the genome for common variants associated with plasma lipids in >100,000 individuals of European ancestry. Here we report 95 significantly associated loci (P < 5 x 10(-8)), with 59 showing genome-wide significant association with lipid traits for the first time. The newly reported associations include single nucleotide polymorphisms (SNPs) near known lipid regulators (for example, CYP7A1, NPC1L1 and SCARB1) as well as in scores of loci not previously implicated in lipoprotein metabolism. The 95 loci contribute not only to normal variation in lipid traits but also to extreme lipid phenotypes and have an impact on lipid traits in three non-European populations (East Asians, South Asians and African Americans). Our results identify several novel loci associated with plasma lipids that are also associated with CAD. Finally, we validated three of the novel genes-GALNT2, PPP1R3B and TTC39B-with experiments in mouse models. Taken together, our findings provide the foundation to develop a broader biological understanding of lipoprotein metabolism and to identify new therapeutic opportunities for the prevention of CAD.
Indexed as
Genome-Wide Association StudyAnimalsAsian PeopleBlack or African AmericanCholesterol, HDLCholesterol, LDLCoronary Artery DiseaseEuropeFemaleGenetic LociGenotypeHumansLipid MetabolismLipidsLiverMaleCholesterol, HDLCholesterol, LDLLipidsN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferasePpp1r3b protein, mouseProtein Phosphatase 1Triglycerides
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.
Biological, clinical and population relevance of 95 loci for blood lipids. · full record | OpenQuestion