Evidence map›Paper›PMID 20686509›Full record

ArticleThe ISME journal2011

Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium.

Athanasios Lykidis, Chia-Lung Chen, Susannah G Tringe, Alice C McHardy, Alex Copeland, Nikos C Kyrpides, Philip Hugenholtz, Hervé Macarie, Alejandro Olmos, Oscar Monroy and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
12.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 133 citations in OpenAlex.

  1. Genomic and taxonomic characterization of the Comamonas sp. nov., a bacterium isolated from Brazilian Cerrado soil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 5 countries.

Athanasios LykidisJoint Genome Institute, Lawrence National Berkeley Laboratory, Walnut Creek, CA, USA.
Chia-Lung Chen
Susannah G Tringe
Alice C McHardy
Alex Copeland
Nikos C Kyrpides
Philip Hugenholtz
Hervé Macarie
Alejandro Olmos
Oscar Monroy
Wen-Tso Liu
Lawrence Berkeley National Laboratory · USUniversidad Autónoma Metropolitana · MXInstitut de Recherche pour le Développement · FRJoint Genome Institute · USMax Planck Institute for Informatics · DENational University of Singapore · SGUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Terephthalate (TA) is one of the top 50 chemicals produced worldwide. Its production results in a TA-containing wastewater that is treated by anaerobic processes through a poorly understood methanogenic syntrophy. Using metagenomics, we characterized the methanogenic consortium inside a hyper-mesophilic (that is, between mesophilic and thermophilic), TA-degrading bioreactor. We identified genes belonging to dominant Pelotomaculum species presumably involved in TA degradation through decarboxylation, dearomatization, and modified β-oxidation to H(2)/CO(2) and acetate. These intermediates are converted to CH(4)/CO(2) by three novel hyper-mesophilic methanogens. Additional secondary syntrophic interactions were predicted in Thermotogae, Syntrophus and candidate phyla OP5 and WWE1 populations. The OP5 encodes genes capable of anaerobic autotrophic butyrate production and Thermotogae, Syntrophus and WWE1 have the genetic potential to oxidize butyrate to CO(2)/H(2) and acetate. These observations suggest that the TA-degrading consortium consists of additional syntrophic interactions beyond the standard H(2)-producing syntroph-methanogen partnership that may serve to improve community stability.

Indexed as

EcosystemBiodegradation, EnvironmentalBioreactorsEuryarchaeotaMetagenomeMethanePeptococcaceaePhthalic AcidsRNA, Ribosomal, 16SMethanePhthalic AcidsRNA, Ribosomal, 16Sterephthalic acid

Identifiers

PMID20686509
PMCPMC3105669
OpenAlexW2104098426

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.