Evidence map›Paper›PMID 20686086›Full record

ArticleJournal of clinical microbiology2010

Molecular Basis of pathogenicity in Helicobacter pylori clinical isolates.

Ivy Bastos Ramis, Tesiê Leopoldo Fonseca, Ernani Pinho de Moraes, Márcia Silveira Fernandes, Raul Mendoza-Sassi, Obirajara Rodrigues, Carlos Renan Varela Juliano, Carlos James Scaini, Pedro Eduardo Almeida da Silva

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Gene polymorphisms of pathogenicWorld journal of gastroenterology · 2016
    Review
  2. Review
  3. Advances in gastric cancer prevention.World journal of clinical oncology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ivy Bastos RamisLaboratório de Biologia Molecular, Universidade Federal do Rio Grande, Rio Grande, RS, Brazil.
Tesiê Leopoldo Fonseca
Ernani Pinho de Moraes
Márcia Silveira Fernandes
Raul Mendoza-Sassi
Obirajara Rodrigues
Carlos Renan Varela Juliano
Carlos James Scaini
Pedro Eduardo Almeida da Silva
Universidade Federal do Rio Grande · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study identified pathogenicity genes in 40 Helicobacter pylori clinical isolates. The cagA, vacA, and iceA genes were detected in 65%, 97.5%, and 97.5% of the isolates, respectively. The cagA, iceA1, and vacAs1a/m1 genes were related to erosive gastritis, whereas the vacAs2/m2 and iceA2 genes were associated with enanthematous gastritis.

Indexed as

Antigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsDNA, BacterialHelicobacter InfectionsHelicobacter pyloriHumansPolymerase Chain ReactionVirulence FactorsAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinscagA protein, Helicobacter pyloriDNA, Bacterialice nucleation proteinVacA protein, Helicobacter pyloriVirulence Factors

Identifiers

PMID20686086
PMCPMC2953070
OpenAlexW2137220171

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.