Evidence map›Paper›PMID 20686077›Full record

ArticleJournal of clinical microbiology2010

Microevolution of Mycobacterium tuberculosis in a tuberculosis patient.

Sahal A M Al-Hajoj, Onno Akkerman, Ida Parwati, Saad al-Gamdi, Zeaur Rahim, Dick van Soolingen, Jakko van Ingen, Philip Supply, Adri G M van der Zanden

Abstract readCase Reports
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
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  7. Deciphering Within-Host Microevolution ofMicrobiology and molecular biology reviews : MMBR · 2019
    Review
  8. Review
  9. Article
  10. Review
  11. Frontiers in microbiology · 2017
    Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sahal A M Al-HajojDepartment of Comparative Medicine, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia. hajoj@kfshrc.edu.sa
Onno Akkerman
Ida Parwati
Saad al-Gamdi
Zeaur Rahim
Dick van Soolingen
Jakko van Ingen
Philip Supply
Adri G M van der Zanden

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Five Mycobacterium tuberculosis isolates were obtained from three body sites from a Dutch patient. The isolates displayed a single genotype by 24-locus MIRU-VNTR typing (except for a single locus not amplified from one isolate) but were differentiated by small variations in IS6110 fingerprints, spoligotypes, 6 hypervariable MIRU-VNTR loci, and/or DiversiLab profiles, revealing patterns of microevolution in a clonal infection.

Indexed as

Bacterial Typing TechniquesDNA FingerprintingEvolution, MolecularCluster AnalysisDNA, BacterialDNA Transposable ElementsFemaleGenotypeHumansMiddle AgedMycobacterium tuberculosisNetherlandsTuberculosisDNA, BacterialDNA Transposable Elements

Identifiers

PMID20686077
PMCPMC2953119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.