Evidence map›Paper›PMID 20686025›Full record

ArticleJournal of virology2010

Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains.

Pablo Guardado-Calvo, Eva M Muñoz, Antonio L Llamas-Saiz, Gavin C Fox, Richard Kahn, David T Curiel, Joel N Glasgow, Mark J van Raaij

Abstract readComparative Study
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Virus recognition of glycan receptors.Current opinion in virology · 2019
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pablo Guardado-CalvoDepartamento de Bioquímica y Biología Molecular, Facultad de Farmacia, Universidad de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
Eva M Muñoz
Antonio L Llamas-Saiz
Gavin C Fox
Richard Kahn
David T Curiel
Joel N Glasgow
Mark J van Raaij

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ALVAREZ, RICHARD · 2001 to 2010
$80.3M
Development of double-targeted vectors for long-term vascular expression in vivoR01HL092941 · NHLBI · WASHINGTON UNIVERSITY · PI CURIEL, DAVID TERRY · 2009 to 2010
$1.2M
NHLBI NIH HHS 1R01HL092941NHLBI NIH HHS R01 HL092941NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

Adenovirus isolate NADC-1, a strain of porcine adenovirus type 4, has a fiber containing an N-terminal virus attachment region, shaft and head domains, and a C-terminal galectin domain connected to the head by an RGD-containing sequence. The crystal structure of the head domain is similar to previously solved adenovirus fiber head domains, but specific residues for binding the coxsackievirus and adenovirus receptor (CAR), CD46, or sialic acid are not conserved. The structure of the galectin domain reveals an interaction interface between its two carbohydrate recognition domains, locating both sugar binding sites face to face. Sequence evidence suggests other tandem-repeat galectins have the same arrangement. We show that the galectin domain binds carbohydrates containing lactose and N-acetyl-lactosamine units, and we present structures of the galectin domain with lactose, N-acetyl-lactosamine, 3-aminopropyl-lacto-N-neotetraose, and 2-aminoethyl-tri(N-acetyl-lactosamine), confirming the domain as a bona fide galectin domain.

Indexed as

Adenoviruses, PorcineAmino Acid SequenceAnimalsBinding SitesCapsid ProteinsCarbohydrate SequenceCrystallography, X-RayGalectinsGenetic VectorsLigandsModels, MolecularMolecular Sequence DataOligosaccharidesProtein Structure, TertiarySequence Homology, Amino AcidStatic ElectricityCapsid ProteinsGalectinshexon capsid protein, AdenovirusLigandsOligosaccharides

Identifiers

PMID20686025
PMCPMC2950603

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.