Evidence map›Paper›PMID 20684632›Full record

ArticleThe journal of physical chemistry. B2010

Characterization of perfluorooctylbromide-based nanoemulsion particles using atomistic molecular dynamics simulations.

Sun-Joo Lee, Brett Olsen, Paul H Schlesinger, Nathan A Baker

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sun-Joo LeeDepartment of Biochemistry and Molecular Biophysics, Computational and Molecular Biophysics Graduate Program, Washington University in St. Louis, Missouri 63110, USA.
Brett Olsen
Paul H Schlesinger
Nathan A Baker
Washington University in St. Louis · US

Funding

VISUALIZATION TOOLS FOR AUTOMATED MOLECULAR MICROSCOPYP41RR008605 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PAPADOPOULOS, PHILIP · 1994 to 2011
$28.1M
YEAST ER MOLECULAR CHAPERONE TRANSLOCATION: GENOME DATABANK HOMOLOGSP41RR006009 · NCRR · MELLON PITTS CORPORATION (MPC CORP) · PI KNOLL, ERIC · 1990 to 2011
$22.0M
UIUC Nanomaterials & Nanofabrication for Targeting CancerU54CA119342 · NCI · WASHINGTON UNIVERSITY · PI WICKLINE, SAMUEL A · 2005 to 2009
$16.5M
APBS: NANOSCALE BIOMOLECULAR ELECTROSTATICS SOFTWARER01GM069702 · NIGMS · WASHINGTON UNIVERSITY · PI BAKER, NATHAN A. · 2004 to 2021
$6.2M
NCI NIH HHS U54 CA119342NCI NIH HHS U54 CA11934205NCRR NIH HHS P41 RR006009NCRR NIH HHS P41 RR008605NCRR NIH HHS P41 RR0860516NIGMS NIH HHS R01 GM069702
6 · The paper itself

Abstract

Perfluorocarbon-based nanoemulsion particles have arisen as promising platforms for the cellular delivery of imaging and therapeutic agents to specific targets. However, current knowledge of the agent delivery mechanism is limited to qualitative and phenomenological models. Lack of detail at the molecular level has hence delayed optimizing or customizing nanoemulsion particles for therapeutic and imaging applications. Here we report the first atomistic structural details of a perfluorooctylbromide-based (PFOB-based) nanoemulsion particle (NEP) with a 1-palmitoyl-2-oleoyl-phosphatidylcholine (POPC) lipid emulsifier. Newly developed PFOB force-field parameters were used in molecular dynamics simulations to model the PFOB-NEP interface in a planar configuration. These PFOB force field parameters were developed and tested to reproduce the characteristics of bulk PFOB as well as PFOB at interfaces with water and emulsifying phospholipids. The modeled PFOB-NEP interface demonstrated significant intercalation of PFOB into the emulsifying lipid monolayer and consequent changes in the structural, electrostatic, and mechanical properties of the POPC monolayer and PFOB. This intercalation provides an explanation for experimental data demonstrating melittin tryptophan fluorescence quenching upon binding to the nanoemulsion particles through the observation of direct contact between the melittin tryptophan and the PFOB bromine. Additionally, the atomistic details of the PFOB-NEP interface structure provided by our simulations are used to suggest the influence of each component on PFOB-NEP delivery function which will be tested in future coarse-grained simulations.

Indexed as

Molecular Dynamics SimulationEmulsionsEngineeringFluorocarbonsHydrocarbons, BrominatedMelittenMolecular ConformationNanostructuresSpectrometry, FluorescenceStatic ElectricitySurface PropertiesTryptophanWaterEmulsionsFluorocarbonsHydrocarbons, BrominatedMelittenperflubronTryptophanWater

Identifiers

PMID20684632
PMCPMC2917838
OpenAlexW2015363822

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.