Evidence map›Paper›PMID 20683632›Full record

ReviewFunctional & integrative genomics2010

Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence.

James Breen, Matthew Bellgard

Abstract readReview
PubMed Publisher
In one paragraph

Review in Functional & integrative genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Genetic breakthroughs in theFrontiers in plant science · 2023
    Review
  6. International journal of molecular sciences · 2022
    Article
  7. Infection by3 Biotech · 2022
    Article
  8. Article
  9. The Cell Wall Proteome ofFrontiers in plant science · 2021
    Article
  10. Article
  11. RicePlant physiology · 2020
    Article
  12. Article
  13. GenesGenes · 2020
    Article
  14. Article
  15. Article
  16. GhABP19, a Novel Germin-Like Protein FromFrontiers in plant science · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

James BreenInstitute for Plant Biology, University of Zurich, Zollikerstrasse 107, 8008 Zurich, Switzerland. jbreen@access.uzh.ch
Matthew Bellgard

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent release of the genome sequences of a number of crop and model plant species has made it possible to define the genome organisation and functional characteristics of specific genes and gene families of agronomic importance. For instance, Sorghum bicolor, maize (Zea mays) and Brachypodium distachyon genome sequences along with the model grass species rice (Oryza sativa) enable the comparative analysis of genes involved in plant defence. Germin-like proteins (GLPs) are a small, functionally and taxonomically diverse class of cupin-domain containing proteins that have recently been shown to cluster in an area of rice chromosome 8. The genomic location of this gene cluster overlaps with a disease resistance QTL that provides defence against two rice fungal pathogens (Magnaporthe oryzae and Rhizoctonia solani). Studies showing the involvement of GLPs in basal host resistance against powdery mildew (Blumeria graminis ssp.) have also been reported in barley and wheat. In this mini-review, we compare the close proximity of GLPs in publicly available cereal crop genomes and discuss the contribution that these proteins, and their genome sequence organisation, play in plant defence.

Indexed as

Edible GrainGenome, PlantGlycoproteinsMultigene FamilyPlant ProteinsAmino Acid SequenceGenes, PlantImmunityModels, MolecularMolecular Sequence DataPhylogenyProtein ConformationSequence AlignmentgerminGlycoproteinsPlant Proteins

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.