Evidence map›Paper›PMID 20682769›Full record

ArticleThe Journal of biological chemistry2010

Identification of a pentatricopeptide repeat protein implicated in splicing of intron 1 of mitochondrial nad7 transcripts.

Anna Koprivova, Catherine Colas des Francs-Small, Grant Calder, Sam T Mugford, Sandra Tanz, Bok-Rye Lee, Bernd Zechmann, Ian Small, Stanislav Kopriva

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 139 citations in OpenAlex.

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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Anna KoprivovaDepartment of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom.
Catherine Colas des Francs-Small
Grant Calder
Sam T Mugford
Sandra Tanz
Bok-Rye Lee
Bernd Zechmann
Ian Small
Stanislav Kopriva
John Innes Centre · GBAustralian Research Council · AUUniversity of Graz · ATUniversity of Western Australia · AU

Funding

Austrian Science Fund FWF P 20619Biotechnology and Biological Sciences Research Council BB/E009912/1
6 · The paper itself

Abstract

Splicing of plant organellar transcripts is facilitated by members of a large protein family, the pentatricopeptide repeat proteins. We have identified a pentatricopeptide repeat protein in a genetic screen for mutants resistant to inhibition of root growth by buthionine sulfoximine (BSO), an inhibitor of glutathione synthesis and consequently named BIR6 (BSO-insensitive roots 6). BIR6 is involved in splicing of intron 1 of the mitochondrial nad7 transcript. Loss-of-function mutations in BIR6 result in a strongly reduced accumulation of fully processed nad7 transcript. This affects assembly of Complex I and results in moderate growth retardation. In agreement with disruption of Complex I function, the genes encoding alternative NADH oxidizing enzymes are induced in the mutant, and the mutant plants are less sensitive to mannitol and salt stress. Mutation in the BIR6 gene allowed normal root growth in presence of BSO and strongly attenuated depletion of glutathione content at these conditions. The same phenotype was observed with other mutants affected in function of Complex I, thus reinforcing the importance of Complex I function for cellular redox homeostasis.

Indexed as

Genes, PlantIntronsRNA SplicingAntimetabolitesArabidopsisArabidopsis ProteinsButhionine SulfoximineElectron Transport Complex IGlutathioneMitochondriaPlant RootsRecombinant Fusion ProteinsAntimetabolitesArabidopsis ProteinsButhionine SulfoximineElectron Transport Complex IGlutathionepentatricopeptide repeat protein, ArabidopsisRecombinant Fusion Proteins

Identifiers

PMID20682769
PMCPMC2952220
OpenAlexW1980664641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.