Evidence map›Paper›PMID 20680279›Full record

ArticleCurrent microbiology2011

Identification of differentially expressed genes in Flammulina velutipes with anti-tyrosinase activity.

Sang-Yoon Kim, Won-Sik Kong, Jae-Yong Cho

Abstract read
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In one paragraph

Article in Current microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Sang-Yoon KimDepartment of Pharmaceutical Engineering, College of Health Science, Sangji University, Gangwon-do, 220-702, Korea.
Won-Sik Kong
Jae-Yong Cho
National Horticultural Research Institute · NGSangji University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It was previously shown that fruiting bodies of the mushroom, Flammulina velutipes, exert anti-tyrosinase activity by producing a triacylglycerol characterized as 1',3'-dilinolenoyl-2'-linoleoylglycerol (LnLLn). In this study, we provide evidence that the mycelia of F. velutipes grown on glucose, but not on glycerol, exhibit anti-tyrosinase activity. To identify genes possibly involved in the process of expressing anti-tyrosinase activity in F. velutipes, a reverse transcription-polymerase chain reaction (RT-PCR) method that involves annealing control primers (ACPs) was employed. Using 120 ACPs, a total of 84 differentially expressed genes (DEGs) in F. velutipes mycelia with anti-tyrosinase activity were cloned and sequenced. Basic Local Alignment Search Tool (BLAST) searches revealed that 72 of the genes have known sequence homology. Of these, three genes involved in the synthesis and modification of fatty acids were selected and further quantified by real-time RT-PCR. These genes involved in fatty acid-biosynthetic processes can be potential candidates for further studies related to the development of a new anti-browning agent.

Indexed as

Gene Expression ProfilingGenes, FungalCulture MediaDiglyceridesEnzyme InhibitorsFlammulinaGlucoseGlycerolHyphaeMonophenol MonooxygenaseReverse Transcriptase Polymerase Chain Reaction1,3-dilinoleoylglycerolCulture MediaDiglyceridesEnzyme InhibitorsGlucoseGlycerolMonophenol Monooxygenase

Identifiers

PMID20680279
OpenAlexW2033010781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.