Evidence map›Paper›PMID 20679214›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Heterodimers of NF-kappaB transcription factors DIF and Relish regulate antimicrobial peptide genes in Drosophila.

Takahiro Tanji, Eun-Young Yun, Y Tony Ip

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A genome-wide survey reveals a diverse array of enhancers coordinate thebioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. The functionalFrontiers in immunology · 2025
    Article
  9. Article
  10. Review
  11. Identification and characterization of a Relish-type NF-κB, DvRelish, inFrontiers in cellular and infection microbiology · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. International journal of molecular sciences · 2022
    Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 4 countries.

Takahiro TanjiDepartment of Cell Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Eun-Young Yun
Y Tony Ip
Institute of Molecular Medicine · INIwate Medical University · JPNational Academy of Agricultural Science · KR

Funding

PILOT AND FEASIBILITY PROGRAMP30DK032520 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CZECH, MICHAEL P · 1986 to 2010
$14.6M
Genetic analysis of damage-induced intestinal stem cell division in DrosophilaR01DK083450 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 2010 to 2024
$4.7M
Molecular mechanisms of Drosophilia immune responseR01GM053269 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 1995 to 2008
$2.3M
Host-microbe interaction in Drosophila gutR21DK075545 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 2007 to 2008
$442k
NIDDK NIH HHS DK32520NIDDK NIH HHS P30 DK032520NIDDK NIH HHS R01 DK083450NIDDK NIH HHS R21 DK075545NIGMS NIH HHS GM53269NIGMS NIH HHS R01 GM053269
6 · The paper itself

Abstract

The innate immune response in Drosophila involves the inducible expression of antimicrobial peptide genes mediated by the Toll and IMD signaling pathways. Dorsal and DIF act downstream of Toll, whereas Relish acts downstream of IMD to regulate target gene expression. Dorsal, DIF, and Relish are NF-kappaB-related transcription factors and function as obligate dimers, but it is not clear how the various dimer combinations contribute to the innate immune response. We systematically examined the dimerization tendency of these proteins through the use of transgenic assays. The results show that all combinations of homo- and heterodimers are formed, but with varying degrees of efficiency. The formation of the DIF-Relish heterodimer is particularly interesting because it may mediate signaling for the seemingly independent Toll and IMD pathways. By incorporating a flexible peptide linker, we specifically tested the functions of the DIF;Relish (a ; sign represents the peptide linker) linked heterodimer. Our results demonstrate that the linked heterodimer can activate target genes of both the Toll and IMD pathways. The DIF and Relish complex is detectable in whole animal extracts, suggesting that this heterodimer may function in vivo to increase the spectrum and level of antimicrobial peptide production in response to different infections.

Indexed as

AnimalsAnimals, Genetically ModifiedAntimicrobial Cationic PeptidesBlotting, WesternCloning, MolecularDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEscherichia coliFemaleGene Expression RegulationHost-Pathogen InteractionsMaleNF-kappa BProtein MultimerizationReverse Transcriptase Polymerase Chain ReactionAntimicrobial Cationic Peptidescecropin ADif protein, DrosophilaDNA-Binding ProteinsDptB protein, DrosophilaDrosophila ProteinsDRS protein, Drosophilaimd protein, DrosophilaNF-kappa BRel protein, DrosophilaRibosomal ProteinsRpL32 protein, DrosophilaTl protein, DrosophilaToll-Like ReceptorsTranscription Factors

Identifiers

PMID20679214
PMCPMC2930453
OpenAlexW2022821618

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.