Evidence map›Paper›PMID 20678197›Full record

ArticleBMC microbiology2010

Evidence for a bimodal distribution of Escherichia coli doubling times below a threshold initial cell concentration.

Peter L Irwin, Ly-Huong T Nguyen, George C Paoli, Chin-Yi Chen

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Facile, high-throughput protein purification enabled by high-efficiency protease elution.Protein science : a publication of the Protein Society · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Peter L IrwinMolecular Characterization of Foodborne Pathogens Research Unit, Agricultural Research Service, US Department of Agriculture, Eastern Regional Research Center, Wyndmoor, PA 19038, USA. peter.irwin@ars.usda.gov
Ly-Huong T Nguyen
George C Paoli
Chin-Yi Chen
Agricultural Research Service · USDepartment of Agriculture · PHEastern Regional Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn the process of developing a microplate-based growth assay, we discovered that our test organism, a native E. coli isolate, displayed very uniform doubling times (tau) only up to a certain threshold cell density. Below this cell concentration (<or= 100 -1,000 CFU mL-1 ; <or= 27-270 CFU well-1) we observed an obvious increase in the tau scatter.

resultsWorking with a food-borne E. coli isolate we found that tau values derived from two different microtiter platereader-based techniques (i.e., optical density with growth time {=OD[t]} fit to the sigmoidal Boltzmann equation or time to calculated 1/2-maximal OD {=tm} as a function of initial cell density {=tm[CI]}) were in excellent agreement with the same parameter acquired from total aerobic plate counting. Thus, using either Luria-Bertani (LB) or defined (MM) media at 37 degrees C, tau ranged between 17-18 (LB) or 51-54 (MM) min. Making use of such OD[t] data we collected many observations of tau as a function of manifold initial or starting cell concentrations (CI). We noticed that tau appeared to be distributed in two populations (bimodal) at low CI. When CI <or=100 CFU mL-1 (stationary phase cells in LB), we found that about 48% of the observed tau values were normally distributed around a mean (mutau1) of 18 +/- 0.68 min (+/- sigmatau1) and 52% with mutau2 = 20 +/- 2.5 min (n = 479). However, at higher starting cell densities (CI>100 CFU mL-1), the tau values were distributed unimodally (mutau = 18 +/- 0.71 min; n = 174). Inclusion of a small amount of ethyl acetate to the LB caused a collapse of the bimodal to a unimodal form. Comparable bimodal tau distribution results were also observed using E. coli cells diluted from mid-log phase cultures. Similar results were also obtained when using either an E. coli O157:H7 or a Citrobacter strain. When sterile-filtered LB supernatants, which formerly contained relatively low concentrations of bacteria(1,000-10,000 CFU mL-1), were employed as a diluent, there was an evident shift of the two populations towards each other but the bimodal effect was still apparent using either stationary or log phase cells.

conclusionThese data argue that there is a dependence of growth rate on starting cell density.

Indexed as

AnimalsChickensEscherichia coliKinetics

Identifiers

PMID20678197
PMCPMC2923132
OpenAlexW1593425047

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.