Evidence map›Paper›PMID 20676906›Full record

ArticleAmino acids2011

The dynamic stress-induced "O-GlcNAc-ome" highlights functions for O-GlcNAc in regulating DNA damage/repair and other cellular pathways.

Natasha E Zachara, Henrik Molina, Ker Yi Wong, Akhilesh Pandey, Gerald W Hart

Open access · greenAbstract read
In one paragraph

Article in Amino acids, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
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  5. OGT and OGA: Sweet guardians of the genome.The Journal of biological chemistry · 2024
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  10. Iron and the Pathophysiology of Diabetes.Annual review of physiology · 2023
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  15. TargetingFrontiers in oncology · 2022
    Review
  16. Review
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  19. Role ofPhysiological reviews · 2021
    Review
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Natasha E ZacharaThe Department of Biological Chemistry, The Johns Hopkins University School of Medicine, 725 N. Wolfe Street, Baltimore, MD 21205-2185, USA. nzachara@jhmi.edu
Henrik Molina
Ker Yi Wong
Akhilesh Pandey
Gerald W Hart
Johns Hopkins University · USJohns Hopkins Medicine · US

Funding

TCP5: ACTIVE SITE LABELING REAGENT FOR ACETYLTRANSFERASESU54RR020839 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 2004 to 2011
$27.4M
JHU-UMD Diabetes Research CenterP30DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI WONDISFORD, FREDRIC E. · 2013 to 2017
$9.7M
ROLE OF CELL-SURFACE SIALYLATION IN TUMOR METASTASISR01CA042486 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HART, GERALD WARREN · 1986 to 2013
$4.9M
Cytosolic O-Glycosylation and Insulin SignalingR01DK061671 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI HART, GERALD WARREN · 2002 to 2014
$4.0M
GLYCOCONJUGATES IN DEVELOPMENT AND IMMUNITYR37HD013563 · NICHD · JOHNS HOPKINS UNIVERSITY · PI HART, GERALD WARREN · 1998 to 2007
$3.4M
O-GlcNAc:Developing New Tool for Assessment of GlycemiaR21DK071280 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI HART, GERALD WARREN · 2005 to 2006
$653k
NHLBI PROTEOMICS INITIATIVE-N01HV28180-268028180-268028180N01HV028180 · HV · JOHNS HOPKINS UNIVERSITY · PI VAN EYK, JENNIFER E · 2002 to 2006
–
NCI NIH HHS CA R01-42486NCI NIH HHS R01 CA042486NCRR NIH HHS U54 RR020839NCRR NIH HHS U54RR020839NHLBI NIH HHS N01 HV028180NHLBI NIH HHS N01-HV-28180NICHD NIH HHS HD R37-13563NIDDK NIH HHS DK-R01-61671NIDDK NIH HHS DK-R21/33-71280NIDDK NIH HHS P30 DK079637NIDDK NIH HHS R01 DK061671
6 · The paper itself

Abstract

The modification of nuclear, mitochondrial, and cytoplasmic proteins by O-linked β-N-acetylglucosamine (O-GlcNAc) is a dynamic and essential post-translational modification of metazoans. Numerous forms of cellular injury lead to elevated levels of O-GlcNAc in both in vivo and in vitro models, and elevation of O-GlcNAc levels before, or immediately after, the induction of cellular injury is protective in models of heat stress, oxidative stress, endoplasmic reticulum (ER) stress, hypoxia, ischemia reperfusion injury, and trauma hemorrhage. Together, these data suggest that O-GlcNAc is a regulator of the cellular stress response. However, the molecular mechanism(s) by which O-GlcNAc regulates protein function leading to enhanced cell survival have not been identified. In order to determine how O-GlcNAc modulates stress tolerance in these models we have used stable isotope labeling with amino acids in cell culture to determine the identity of proteins that undergo O-GlcNAcylation in response to heat shock. Numerous proteins with diverse functions were identified, including NF-90, RuvB-like 1 (Tip49α), RuvB-like 2 (Tip49β), and several COPII vesicle transport proteins. Many of these proteins bind double-stranded DNA-dependent protein kinase (PK), or double-stranded DNA breaks, suggesting a role for O-GlcNAc in regulating DNA damage signaling or repair. Supporting this hypothesis, we have shown that DNA-PK is O-GlcNAc modified in response to numerous forms of cellular stress.

Indexed as

DNA DamageDNA RepairStress, PhysiologicalAcetylglucosamineAnimalsChlorocebus aethiopsCOS CellsGlycosylationProteinsAcetylglucosamineProteins

Identifiers

PMID20676906
PMCPMC3329784
OpenAlexW2001156696

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.