Evidence map›Paper›PMID 20676125›Full record

ArticleOncogene2010

A previously unrecognized promoter of LMO2 forms part of a transcriptional regulatory circuit mediating LMO2 expression in a subset of T-acute lymphoblastic leukaemia patients.

S H Oram, J A I Thoms, C Pridans, M E Janes, S J Kinston, S Anand, J-R Landry, R B Lock, P-S Jayaraman, B J Huntly and 2 more

Abstract read
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In one paragraph

Article in Oncogene, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 41 citations in OpenAlex.

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  8. Activation of theBlood · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

S H OramDepartment of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
J A I Thoms
C Pridans
M E Janes
S J Kinston
S Anand
J-R Landry
R B Lock
P-S Jayaraman
B J Huntly
J E Pimanda
B Göttgens
University of Cambridge · GBUNSW Sydney · AUChildren's Cancer Institute Australia · AUInstitute for Research in Immunology and Cancer · CAUniversity of Birmingham · GB

Funding

Cancer Research UKMedical Research Council G0800784Medical Research Council G116/187National Centre for the Replacement, Refinement and Reduction of Animals in Research G0900729/1
6 · The paper itself

Abstract

The T-cell oncogene Lim-only 2 (LMO2) critically influences both normal and malignant haematopoiesis. LMO2 is not normally expressed in T cells, yet ectopic expression is seen in the majority of T-acute lymphoblastic leukaemia (T-ALL) patients with specific translocations involving LMO2 in only a subset of these patients. Ectopic lmo2 expression in thymocytes of transgenic mice causes T-ALL, and retroviral vector integration into the LMO2 locus was implicated in the development of clonal T-cell disease in patients undergoing gene therapy. Using array-based chromatin immunoprecipitation, we now demonstrate that in contrast to B-acute lymphoblastic leukaemia, human T-ALL samples largely use promoter elements with little influence from distal enhancers. Active LMO2 promoter elements in T-ALL included a previously unrecognized third promoter, which we demonstrate to be active in cell lines, primary T-ALL patients and transgenic mice. The ETS factors ERG and FLI1 previously implicated in lmo2-dependent mouse models of T-ALL bind to the novel LMO2 promoter in human T-ALL samples, while in return LMO2 binds to blood stem/progenitor enhancers in the FLI1 and ERG gene loci. Moreover, LMO2, ERG and FLI1 all regulate the +1 enhancer of HHEX/PRH, which was recently implicated as a key mediator of early progenitor expansion in LMO2-driven T-ALL. Our data therefore suggest that a self-sustaining triad of LMO2/ERG/FLI1 stabilizes the expression of important mediators of the leukaemic phenotype such as HHEX/PRH.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsChromatin ImmunoprecipitationDNA-Binding ProteinsGene ExpressionGene Expression Regulation, NeoplasticHomeodomain ProteinsHumansLIM Domain ProteinsMetalloproteinsMiceMice, TransgenicOligonucleotide Array Sequence AnalysisPrecursor T-Cell Lymphoblastic Leukemia-LymphomaPromoter Regions, GeneticProto-Oncogene Protein c-fli-1Adaptor Proteins, Signal TransducingDNA-Binding ProteinsERG protein, humanFLI1 protein, humanHHEX protein, humanHomeodomain ProteinsLIM Domain ProteinsLMO2 protein, humanMetalloproteinsProto-Oncogene Protein c-fli-1Proto-Oncogene ProteinsTrans-ActivatorsTranscriptional Regulator ERGTranscription Factors

Identifiers

PMID20676125
OpenAlexW2095829772

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.