Evidence map›Paper›PMID 20673990›Full record

ArticleCell2010

A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.

Maite Huarte, Mitchell Guttman, David Feldser, Manuel Garber, Magdalena J Koziol, Daniela Kenzelmann-Broz, Ahmad M Khalil, Or Zuk, Ido Amit, Michal Rabani and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,257 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,257citing papers in PubMed, 1 pooled it
43.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,257 citing papers in PubMed, 1 synthesis or guideline pooled it, 2,079 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Beyond the Stomach: Exploring the Role ofExpert reviews in molecular medicine · 2026
    Review
  4. Review
  5. The Role of Long Noncoding RNAs in Modulation of Stress Granules in Cancer.Journal of cellular and molecular medicine · 2026
    Review
  6. RNA-Based Therapies for Treating Monogenic Cardiomyopathies.The Canadian journal of cardiology · 2026
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Rewiring cancer epigenome: lncRNA as modulator of chromatin architecture and neoplastic transformation.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  19. Review
  20. Article

1,197 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Maite HuarteThe Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. mhuarte@broadinstitute.org
Mitchell Guttman
David Feldser
Manuel Garber
Magdalena J Koziol
Daniela Kenzelmann-Broz
Ahmad M Khalil
Or Zuk
Ido Amit
Michal Rabani
Laura D Attardi
Aviv Regev
Eric S Lander
Tyler Jacks
John L Rinn
Broad Institute · USAllen Institute · USStanford University · US

Funding

Genome-wide analysis of regulated chromosomal domains: From mechanisms to cancerR01CA119176 · NCI · WEIZMANN INSTITUTE OF SCIENCE · PI REGEV, AVIV, SEGAL, ERAN · 2006 to 2015
$3.7M
The temporal reconfiguration of regulatory networks: From yeast to cancerDP1OD003958 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI REGEV, AVIV · 2008 to 2011
$3.3M
RNA and Chromatin Formation: From Discovery to MechanismDP2OD006670 · OD · HARVARD UNIVERSITY · PI RINN, JOHN LOUIS · 2009 to 2009
$2.5M
NCI NIH HHS 1R01CA119176-01NCI NIH HHS R01 CA119176NIH HHS DP1 OD003958NIH HHS DP2 OD006670
6 · The paper itself

Abstract

Recently, more than 1000 large intergenic noncoding RNAs (lincRNAs) have been reported. These RNAs are evolutionarily conserved in mammalian genomes and thus presumably function in diverse biological processes. Here, we report the identification of lincRNAs that are regulated by p53. One of these lincRNAs (lincRNA-p21) serves as a repressor in p53-dependent transcriptional responses. Inhibition of lincRNA-p21 affects the expression of hundreds of gene targets enriched for genes normally repressed by p53. The observed transcriptional repression by lincRNA-p21 is mediated through the physical association with hnRNP-K. This interaction is required for proper genomic localization of hnRNP-K at repressed genes and regulation of p53 mediates apoptosis. We propose a model whereby transcription factors activate lincRNAs that serve as key repressors by physically associating with repressive complexes and modulate their localization to sets of previously active genes.

Indexed as

Down-RegulationAnimalsApoptosisHeterogeneous-Nuclear Ribonucleoprotein KHumansMiceMolecular Sequence DataRNA, UntranslatedTranscription, GeneticTumor Suppressor Protein p53Heterogeneous-Nuclear Ribonucleoprotein KRNA, UntranslatedTumor Suppressor Protein p53

Identifiers

PMID20673990
PMCPMC2956184
OpenAlexW2137840425

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.