Evidence map›Paper›PMID 20671954›Full record

ArticleArchaea (Vancouver, B.C.)2010

Phosphorylation and methylation of proteasomal proteins of the haloarcheon Haloferax volcanii.

Matthew A Humbard, Christopher J Reuter, Kheir Zuobi-Hasona, Guangyin Zhou, Julie A Maupin-Furlow

Open access · hybridAbstract read
In one paragraph

Article in Archaea (Vancouver, B.C.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 27 citations in OpenAlex.

  1. C(P)XCG Proteins ofInternational journal of molecular sciences · 2024
    Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Phosphorylation regulates mycobacterial proteasome.Journal of microbiology (Seoul, Korea) · 2014
    Article
  13. Regulation of cardiac proteasomes by ubiquitination, SUMOylation, and beyond.Journal of molecular and cellular cardiology · 2014
    Review
  14. The ancient microbial RIO kinases.The Journal of biological chemistry · 2014
    Review
  15. Protein Ser/Thr/Tyr phosphorylation in the Archaea.The Journal of biological chemistry · 2014
    Review
  16. Article
  17. Review
  18. Prokaryotic proteasomes: nanocompartments of degradation.Journal of molecular microbiology and biotechnology · 2013
    Review
  19. Archaeal proteasomes and sampylation.Sub-cellular biochemistry · 2013
    Review
  20. Extreme challenges and advances in archaeal proteomics.Current opinion in microbiology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Matthew A HumbardDepartment of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611, USA.
Christopher J Reuter
Kheir Zuobi-Hasona
Guangyin Zhou
Julie A Maupin-Furlow
University of Florida · US

Funding

Ubiquitin-like Small Archaeal Protein Modification (SAMPylation)R01GM057498 · NIGMS · UNIVERSITY OF FLORIDA · PI MAUPIN-FURLOW, JULIE A · 2000 to 2024
$4.9M
NIGMS NIH HHS R01 GM057498
6 · The paper itself

Abstract

Proteasomes are composed of 20S core particles (CPs) of alpha- and beta-type subunits that associate with regulatory particle AAA ATPases such as the proteasome-activating nucleotidase (PAN) complexes of archaea. In this study, the roles and additional sites of post-translational modification of proteasomes were investigated using the archaeon Haloferax volcanii as a model. Indicative of phosphorylation, phosphatase-sensitive isoforms of alpha1 and alpha2 were detected by 2-DE immunoblot. To map these and other potential sites of post-translational modification, proteasomes were purified and analyzed by tandem mass spectrometry (MS/MS). Using this approach, several phosphosites were mapped including alpha1 Thr147, alpha2 Thr13/Ser14 and PAN-A Ser340. Multiple methylation sites were also mapped to alpha1, thus, revealing a new type of proteasomal modification. Probing the biological role of alpha1 and PAN-A phosphorylation by site-directed mutagenesis revealed dominant negative phenotypes for cell viability and/or pigmentation for alpha1 variants including Thr147Ala, Thr158Ala and Ser58Ala. An H. volcanii Rio1p Ser/Thr kinase homolog was purified and shown to catalyze autophosphorylation and phosphotransfer to alpha1. The alpha1 variants in Thr and Ser residues that displayed dominant negative phenotypes were significantly reduced in their ability to accept phosphoryl groups from Rio1p, thus, providing an important link between cell physiology and proteasomal phosphorylation.

Indexed as

Protein Processing, Post-TranslationalArchaeal ProteinsHaloferax volcaniiImmunoblottingMethylationMicrobial ViabilityMutagenesis, Site-DirectedMutant ProteinsPhosphoric Monoester HydrolasesPhosphorylationPigments, BiologicalProteasome Endopeptidase ComplexTandem Mass SpectrometryArchaeal ProteinsMutant ProteinsPhosphoric Monoester HydrolasesPigments, BiologicalProteasome Endopeptidase Complex

Identifiers

PMID20671954
PMCPMC2910475
OpenAlexW1999870505

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.