Evidence map›Paper›PMID 20671268›Full record

ArticleInvestigative ophthalmology & visual science2010

Engineered zinc finger nuclease-mediated homologous recombination of the human rhodopsin gene.

David L Greenwald, Siobhan M Cashman, Rajendra Kumar-Singh

Open access · bronzeAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

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  9. Gene and cell-based therapies for inherited retinal disorders: An update.American journal of medical genetics. Part C, Seminars in medical genetics · 2016
    Review
  10. Review
  11. Non-viral therapeutic approaches to ocular diseases: An overview and future directions.Journal of controlled release : official journal of the Controlled Release Society · 2015
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

David L GreenwaldDepartment of Ophthalmology, Tufts University School of Medicine, Boston, MA 02111, USA.
Siobhan M Cashman
Rajendra Kumar-Singh
Tufts University · US

Funding

VP22 AND TAT mediated gene therapy for the CNSR01EY014991 · NEI · UNIVERSITY OF UTAH · PI KUMAR-SINGH, RAJENDRA · 2004 to 2009
$1.4M
NEI NIH HHS EY013887NEI NIH HHS EY014991NEI NIH HHS R01 EY014991
6 · The paper itself

Abstract

purposeNovel zinc finger nucleases (ZFNs) were designed to target the human rhodopsin gene and induce homologous recombination of a donor DNA fragment.

methodsThree-finger zinc finger nucleases were designed based on previously published guidelines. To assay for ZFN specificity, the authors generated human embryonic retinoblast cell lines stably expressing a Pro23His rhodopsin, the most common mutation associated with autosomal dominant retinitis pigmentosa in North America. They report quantification of these rhodopsin-specific ZFNs to induce a targeted double-strand break in the human genome, demonstrate their ability to induce homologous recombination of a donor DNA fragment, and report the quantification of the frequency of ZFN-mediated homologous recombination.

resultsCompared with endogenous homologous recombination, the authors observed a 12-fold increase in homologous recombination and an absolute frequency of ZFN-directed homologous recombination as high as 17% in the human rhodopsin gene.

conclusionsZFNs are chimeric proteins with significant potential for the treatment of inherited diseases. In this study, the authors report the design of novel ZFNs targeting the human rhodopsin gene. These ZFNs may be useful for the treatment of retinal diseases such as retinitis pigmentosa, one of the most common causes of inherited blindness in the developed world. Herein, they also report on several aspects of donor fragment design and in vitro conditions that facilitate ZFN-mediated homologous recombination.

Indexed as

Blotting, WesternCell LineEndodeoxyribonucleasesFluorescent Antibody Technique, IndirectGene ExpressionGenetic EngineeringHumansMutagenesis, Site-DirectedRecombinant Fusion ProteinsRecombination, GeneticRetinaReverse Transcriptase Polymerase Chain ReactionRhodopsinRNA, MessengerTransfectionZinc FingersEndodeoxyribonucleasesRecombinant Fusion ProteinsRhodopsinRNA, Messenger

Identifiers

PMID20671268
PMCPMC3055761
OpenAlexW2081823711

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.