Evidence map›Paper›PMID 20670628›Full record

ArticleInternational journal for parasitology2010

Trypanosoma cruzi I genotypes in different geographical regions and transmission cycles based on a microsatellite motif of the intergenic spacer of spliced-leader genes.

Carolina I Cura, Ana M Mejía-Jaramillo, Tomás Duffy, Juan M Burgos, Marcela Rodriguero, Marta V Cardinal, Sonia Kjos, Rodrigo Gurgel-Gonçalves, Denis Blanchet, Luis M De Pablos and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal for parasitology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 2 pooled it
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 2 syntheses or guidelines pooled it, 167 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Trial
  4. Trial
  5. Article
  6. Article
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  13. New insights intoFrontiers in immunology · 2024
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  14. Fifteen Years after the Definition ofLife (Basel, Switzerland) · 2023
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  15. Article
  16. Pathogens, reservoirs, and vectors involved in the transmission of vector-borne and zoonotic diseases in a Colombian region.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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  17. Article
  18. Extracellular vesicles ofFrontiers in immunology · 2023
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  19. Discrete Typing Units ofPathogens (Basel, Switzerland) · 2022
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  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 13 institutions in 9 countries.

Carolina I CuraLaboratorio de Biología Molecular de la Enfermedad de Chagas, INGEBI-CONICET, Buenos Aires, Argentina.
Ana M Mejía-Jaramillo
Tomás Duffy
Juan M Burgos
Marcela Rodriguero
Marta V Cardinal
Sonia Kjos
Rodrigo Gurgel-Gonçalves
Denis Blanchet
Luis M De Pablos
Nicolás Tomasini
Alexandre da Silva
Graciela Russomando
Cesar A Cuba Cuba
Christine Aznar
Teresa Abate
Mariano J Levin
Antonio Osuna
Ricardo E Gürtler
Patricio Diosque
Aldo Solari
Omar Triana-Chávez
Alejandro G Schijman
Consejo Nacional de Investigaciones Científicas y Técnicas · ARFundación Ciencias Exactas y Naturales · ARNational University of Salta · ARUniversidad de Antioquia · COUniversidad de Granada · ESUniversidade de Brasília · BRUniversity of French Guiana · GFCenters for Disease Control and Prevention · USCentral University of Venezuela · VEDivision of Parasitic Diseases and Malaria · USUniversidad Nacional de Asunción · PYUniversity of Buenos Aires · ARUniversity of Chile · CL

Funding

Ecoepidemiology of Chagas disease in northwest ArgentinaR01TW005836 · FIC · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KITRON, URIEL DAN · 2002 to 2006
$2.0M
FIC NIH HHS R01 TW005836FIC NIH HHS R01 TW05836
6 · The paper itself

Abstract

The intergenic region of spliced-leader (SL-IR) genes from 105 Trypanosoma cruzi I (Tc I) infected biological samples, culture isolates and stocks from 11 endemic countries, from Argentina to the USA were characterised, allowing identification of 76 genotypes with 54 polymorphic sites from 123 aligned sequences. On the basis of the microsatellite motif proposed by Herrera et al. (2007) to define four haplotypes in Colombia, we could classify these genotypes into four distinct Tc I SL-IR groups, three corresponding to the former haplotypes Ia (11 genotypes), Ib (11 genotypes) and Id (35 genotypes); and one novel group, Ie (19 genotypes). Genotypes harbouring the Tc Ic motif were not detected in our study. Tc Ia was associated with domestic cycles in southern and northern South America and sylvatic cycles in Central and North America. Tc Ib was found in all transmission cycles from Colombia. Tc Id was identified in all transmission cycles from Argentina and Colombia, including Chagas cardiomyopathy patients, sylvatic Brazilian samples and human cases from French Guiana, Panama and Venezuela. Tc Ie gathered five samples from domestic Triatoma infestans from northern Argentina, nine samples from wild Mepraia spinolai and Mepraia gajardoi and two chagasic patients from Chile and one from a Bolivian patient with chagasic reactivation. Mixed infections by Tc Ia+Tc Id, Tc Ia+Tc Ie and Tc Id+Tc Ie were detected in vector faeces and isolates from human and vector samples. In addition, Tc Ia and Tc Id were identified in different tissues from a heart transplanted Chagas cardiomyopathy patient with reactivation, denoting histotropism. Trypanosoma cruzi I SL-IR genotypes from parasites infecting Triatoma gerstaeckeri and Didelphis virginiana from USA, T. infestans from Paraguay, Rhodnius nasutus and Rhodnius neglectus from Brazil and M. spinolai and M. gajardoi from Chile are to our knowledge described for the first time.

Indexed as

DNA, IntergenicMicrosatellite RepeatsRNA, Spliced LeaderAnimalsBase SequenceChagas DiseaseDisease ReservoirsDNA, ProtozoanGenotypeGeographyHumansInsect VectorsMolecular Sequence DataPhylogenySequence AlignmentTriatominaeDNA, IntergenicDNA, ProtozoanRNA, Spliced Leader

Identifiers

PMID20670628
PMCPMC3081674
OpenAlexW2037147698

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.