Evidence map›Paper›PMID 20669924›Full record

ArticleBiochemistry2010

Insights into the nitric oxide reductase mechanism of flavodiiron proteins from a flavin-free enzyme.

Takahiro Hayashi, Jonathan D Caranto, David A Wampler, Donald M Kurtz, Pierre Moënne-Loccoz

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 88 citations in OpenAlex.

  1. Review
  2. Article
  3. Hydroxo-bridged active site of flavodiiron NO reductase revealed by NRVS and DFT.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Direct Reduction of NO to NInorganic chemistry · 2022
    Article
  8. What Is the Right Level of Activation of a High-Spin {FeNO}Journal of the American Chemical Society · 2022
    Article
  9. Article
  10. A Nonheme Mononuclear {FeNO}Angewandte Chemie (International ed. in English) · 2021
    Article
  11. Tuning metal-metal interactions for cooperative small molecule activation.Chemical communications (Cambridge, England) · 2021
    Review
  12. Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.Journal of the American Chemical Society · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. A Nonheme, High-Spin {FeNO}Journal of the American Chemical Society · 2017
    Article
  20. Structure/function correlations over binuclear non-heme iron active sites.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Takahiro HayashiDepartment of Science and Engineering, School of Medicine, Oregon Health and Science University, 20000 Northwest Walker Road, Beaverton, Oregon 97006, USA.
Jonathan D Caranto
David A Wampler
Donald M Kurtz
Pierre Moënne-Loccoz
The University of Texas at San Antonio · USOregon Health & Science University · USWalker (United States) · US

Funding

Kurtz NIHR01GM040388 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI KURTZ, DONALD M. · 1988 to 2014
$4.2M
Nitric Oxide Reactions in MetalloenzymesR01GM074785 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MOENNE-LOCCOZ, PIERRE · 2006 to 2019
$3.8M
NIGMS NIH HHS GM040388NIGMS NIH HHS GM74785NIGMS NIH HHS R01 GM040388NIGMS NIH HHS R01 GM074785
6 · The paper itself

Abstract

Flavodiiron proteins (FDPs) catalyze reductive scavenging of dioxygen and nitric oxide in air-sensitive microorganisms. FDPs contain a distinctive non-heme diiron/flavin mononucleotide (FMN) active site. Alternative mechanisms for the nitric oxide reductase (NOR) activity consisting of either protonation of a diiron-bridging hyponitrite or "super-reduction" of a diferrous-dinitrosyl by the proximal FMNH(2) in the rate-determining step have been proposed. To test these alternative mechanisms, we examined a deflavinated FDP (deflavo-FDP) from Thermotoga maritima. The deflavo-FDP retains an intact diiron site but does not exhibit multiturnover NOR or O(2) reductase (O(2)R) activity. Reactions of the reduced (diferrous) deflavo-FDP with nitric oxide were examined by UV-vis absorption, EPR, resonance Raman, and FTIR spectroscopies. Anaerobic addition of nitric oxide up to one NO per diferrous deflavo-FDP results in formation of a diiron-mononitrosyl complex characterized by a broad S = (1)/(2 )EPR signal arising from antiferromagnetic coupling of an S = (3)/(2) {FeNO}(7) with an S = 2 Fe(II). Further addition of NO results in two reaction pathways, one of which produces N(2)O and the diferric site and the other of which produces a stable diiron-dinitrosyl complex. Both NO-treated and as-isolated deflavo-FDPs regain full NOR and O(2)R activities upon simple addition of FMN. The production of N(2)O upon addition of NO to the mononitrosyl deflavo-FDP supports the hyponitrite mechanism, but the concomitant formation of a stable diiron-dinitrosyl complex in the deflavo-FDP is consistent with a super-reduction pathway in the flavinated enzyme. We conclude that a diiron-mononitrosyl complex is an intermediate in the NOR catalytic cycle of FDPs.

Indexed as

Electron Spin Resonance SpectroscopyEscherichia coliFlavinsGene ExpressionIronMetalloproteinsNitric OxideOxidoreductasesSpectrophotometry, UltravioletSpectroscopy, Fourier Transform InfraredThermotoga maritimaFlavinsIronMetalloproteinsNitric Oxidenitric-oxide reductaseOxidoreductases

Identifiers

PMID20669924
PMCPMC2923256
OpenAlexW2020612562

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.