Evidence map›Paper›PMID 20668766›Full record

ArticleOrganic & biomolecular chemistry2010

Structure-activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1.

Anders Bach, Nicolai Stuhr-Hansen, Thor S Thorsen, Nicolai Bork, Irina S Moreira, Karla Frydenvang, Shahrokh Padrah, S Brøgger Christensen, Kenneth L Madsen, Harel Weinstein and 2 more

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. PDZ Domains as Drug Targets.Advanced therapeutics · 2019
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Anders BachDepartment of Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, DK-2100, Copenhagen, Denmark.
Nicolai Stuhr-Hansen
Thor S Thorsen
Nicolai Bork
Irina S Moreira
Karla Frydenvang
Shahrokh Padrah
S Brøgger Christensen
Kenneth L Madsen
Harel Weinstein
Ulrik Gether
Kristian Strømgaard

Funding

STRUCTURE/FUNCTION OF THE HUMAN DOPAMINE TRANSPORTERP01DA012408 · NIDA · WEILL MEDICAL COLL OF CORNELL UNIV · PI WEINSTEIN, HAREL · 1999 to 2015
$14.2M
NIDA NIH HHS P01 DA012408
6 · The paper itself

Abstract

Recently, we described the first small-molecule inhibitor, (E)-ethyl 2-cyano-3-(3,4-dichlorophenyl)acryloylcarbamate (1), of the PDZ domain of protein interacting with Calpha-kinase 1 (PICK1), a potential drug target against brain ischemia, pain and cocaine addiction. Herein, we explore structure-activity relationships of 1 by introducing subtle modifications of the acryloylcarbamate scaffold and variations of the substituents on this scaffold. The configuration around the double bond of 1 and analogues was settled by a combination of X-ray crystallography, NMR and density functional theory calculations. Thereby, docking studies were used to correlate biological affinities with structural considerations for ligand-protein interactions. The most potent analogue obtained in this study showed an improvement in affinity compared to 1 and is currently a lead in further studies of PICK1 inhibition.

Indexed as

PDZ DomainsCarrier ProteinsCrystallography, X-RayHumansModels, MolecularNuclear ProteinsProtein BindingSmall Molecule LibrariesStructure-Activity RelationshipCarrier ProteinsNuclear ProteinsPICk1 protein, humanSmall Molecule Libraries

Identifiers

PMID20668766
PMCPMC3614091

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.