Evidence map›Paper›PMID 20668683›Full record

ArticlePloS one2010

Genetically dependent ERBB3 expression modulates antigen presenting cell function and type 1 diabetes risk.

Hongjie Wang, Yulan Jin, M V Prasad Linga Reddy, Robert Podolsky, Siyang Liu, Ping Yang, Bruce Bode, John Chip Reed, R Dennis Steed, Stephen W Anderson and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. The Association betweenBioMed research international · 2019
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Polymorphisms in the CTSH gene may influence the progression of diabetic retinopathy: a candidate-gene study in the Danish Cohort of Pediatric Diabetes 1987 (DCPD1987).Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2015
    Article
  13. Review
  14. Article
  15. Genetics of polycystic ovary syndrome.Seminars in reproductive medicine · 2014
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Hongjie WangCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta, Georgia, United States of America.
Yulan Jin
M V Prasad Linga Reddy
Robert Podolsky
Siyang Liu
Ping Yang
Bruce Bode
John Chip Reed
R Dennis Steed
Stephen W Anderson
Leigh Steed
Diane Hopkins
Yihua Huang
Jin-Xiong She
Augusta University · USAtlanta Diabetes Associates · US

Funding

Studies of the Immunopathogenesis of Type 1 DiabetesR01HD037800 · NICHD · UNIVERSITY OF FLORIDA · PI SHE, JIN-XIONG · 1999 to 2006
$4.6M
Proteomic changes/progression of human type 1 diabetesR33HD050196 · NICHD · AUGUSTA UNIVERSITY · PI SHE, JIN-XIONG · 2006 to 2008
$1.5M
Development of microarray-based biomarkers for type 1 diR33DK069878 · NIDDK · AUGUSTA UNIVERSITY · PI SHE, JIN-XIONG · 2006 to 2008
$1.1M
NICHD NIH HHS 2R01HD37800NICHD NIH HHS 4R33HD050196NICHD NIH HHS R01 HD037800NICHD NIH HHS R33 HD050196NIDDK NIH HHS 4R33DK069878NIDDK NIH HHS R33 DK069878
6 · The paper itself

Abstract

Type 1 diabetes (T1D) is an autoimmune disease resulting from the complex interaction between multiple susceptibility genes, environmental factors and the immune system. Over 40 T1D susceptibility regions have been suggested by recent genome-wide association studies; however, the specific genes and their role in the disease remain elusive. The objective of this study is to identify the susceptibility gene(s) in the 12q13 region and investigate the functional link to the disease pathogenesis. A total of 19 SNPs in the 12q13 region were analyzed by the TaqMan assay for 1,434 T1D patients and 1,865 controls. Thirteen of the SNPs are associated with T1D (best p = 4x10(-11)), thus providing confirmatory evidence for at least one susceptibility gene in this region. To identify candidate genes, expression of six genes in the region was analyzed by real-time RT-PCR for PBMCs from 192 T1D patients and 192 controls. SNP genotypes in the 12q13 region are the main factors that determine ERBB3 mRNA levels in PBMCs. The protective genotypes for T1D are associated with higher ERBB3 mRNA level (p<10(-10)). Furthermore, ERBB3 protein is expressed on the surface of CD11c(+) cells (dendritic cells and monocytes) in peripheral blood after stimulation with LPS, polyI:C or CpG. Subjects with protective genotypes have significantly higher percentages of ERBB3(+) monocytes and dendritic cells (p = 1.1x10(-9)); and the percentages of ERBB3(+) cells positively correlate with the ability of APC to stimulate T cell proliferation (R(2) = 0.90, p<0.0001). Our results indicate that ERBB3 plays a critical role in determining APC function and potentially T1D pathogenesis.

Indexed as

Antigen-Presenting CellsCD11 AntigensCells, CulturedDiabetes Mellitus, Type 1Flow CytometryGenome-Wide Association StudyGenotypeHumansPolymorphism, Single NucleotideReceptor, ErbB-3Reverse Transcriptase Polymerase Chain ReactionCD11 AntigensReceptor, ErbB-3

Identifiers

PMID20668683
PMCPMC2909911
OpenAlexW1993255974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.