Evidence map›Paper›PMID 20668468›Full record

ArticleThe Journal of investigative dermatology2010

Carriers of rare missense variants in IFIH1 are protected from psoriasis.

Yonghong Li, Wilson Liao, Michele Cargill, Monica Chang, Nori Matsunami, Bing-Jian Feng, Annie Poon, Kristina P Callis-Duffin, Joseph J Catanese, Anne M Bowcock and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 4 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 4 syntheses or guidelines pooled it, 71 citations in OpenAlex.

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  11. TheInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Yonghong LiCelera, Alameda, California 94502, USA. yonghong.li@celera.com
Wilson Liao
Michele Cargill
Monica Chang
Nori Matsunami
Bing-Jian Feng
Annie Poon
Kristina P Callis-Duffin
Joseph J Catanese
Anne M Bowcock
Mark F Leppert
Pui-Yan Kwok
Gerald G Krueger
Ann B Begovich
University of Utah · USUniversity of California, San Francisco · USCompanhia Energética de Pernambuco · BRUniversity of Utah Hospital · USWashington University in St. Louis · US

Funding

VIRAL DAMAGE TO BRAIN AND NEUROMUSCULAR SYSTEMM01RR000064 · NCRR · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 1985 to 2008
$21.7M
Genome-Wide SNP Association in PsoriasisR01AR050266 · NIAMS · WASHINGTON UNIVERSITY · PI BOWCOCK, ANNE MARY · 2007 to 2016
$5.7M
Genetic Analysis of the TNF Pathway in PsoriasisK08AR057763 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIAO, WILSON · 2010 to 2014
$599k
NCRR NIH HHS M01 RR000064NCRR NIH HHS M01-RR00064NIAMS NIH HHS 1R01AR050266NIAMS NIH HHS K08 AR057763
6 · The paper itself

Abstract

Testing of ∼25,000 putative functional single-nucleotide polymorphisms (SNPs) across the human genome in a genetic association study has identified three psoriasis genes, IL12B, IL23R, and IL13. We now report evidence for the association of psoriasis risk with missense SNPs in the interferon induced with helicase C domain 1 gene (IFIH1). The rare alleles of two independent SNPs were associated with decreased risk of psoriasis--rs35667974 (Ile923Val): odds ratio (OR) for minor allele carriers is 0.43, P=2.36 × 10(-5) (2,098 cases vs. 1,748 controls); and rs10930046 (His460Arg): OR for minor allele carriers is 0.51, P=6.47 × 10(-4) (2,098 cases vs. 1,744 controls). Compared to noncarriers, carriers of the 923Val and/or 460Arg variants were protected from psoriasis (OR=0.46, P=5.56 × 10(-8)). To our knowledge, these results suggest that IFIH1 is a previously unreported psoriasis gene.

Indexed as

HeterozygoteMutation, MissenseAdultAutoimmunityDEAD-box RNA HelicasesFemaleGenetic Predisposition to DiseaseHumansInterferon-Induced Helicase, IFIH1MalePolymorphism, Single NucleotidePsoriasisRisk FactorsDEAD-box RNA HelicasesIFIH1 protein, humanInterferon-Induced Helicase, IFIH1

Identifiers

PMID20668468
PMCPMC3680368
OpenAlexW2064583417

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.