Evidence map›Paper›PMID 20668009›Full record

ArticleCarcinogenesis2010

Inherited variation in immune genes and pathways and glioblastoma risk.

Judith A Schwartzbaum, Yuanyuan Xiao, Yanhong Liu, Spyros Tsavachidis, Mitchel S Berger, Melissa L Bondy, Jeffrey S Chang, Susan M Chang, Paul A Decker, Bo Ding and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in Carcinogenesis, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. The Influence of DNA Repair Genes and Prenatal Tobacco Exposure on Risk of Childhood Acute Lymphoblastic Leukemia: A Gene-Environment Interaction Study.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
    Article
  3. Significance ofClinical Medicine Insights. Oncology · 2025
    Article
  4. Glioma.Nature reviews. Disease primers · 2024
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Epidemiologic and molecular prognostic review of glioblastoma.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2014
    Review
  11. Review
  12. Genetic association of CHEK2, GSTP1, and ERCC1 with glioblastoma in the Han Chinese population.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 12 institutions in 5 countries.

Judith A SchwartzbaumDivision of Epidemiology, College of Public Health, Ohio State University, Columbus, OH 43210, USA. jschwartzbaum@cph.osu.edu
Yuanyuan Xiao
Yanhong Liu
Spyros Tsavachidis
Mitchel S Berger
Melissa L Bondy
Jeffrey S Chang
Susan M Chang
Paul A Decker
Bo Ding
Sarah J Hepworth
Richard S Houlston
Fay J Hosking
Robert B Jenkins
Matthew L Kosel
Lucie S McCoy
Patricia A McKinney
Kenneth Muir
Joe S Patoka
Michael Prados
Terri Rice
Lindsay B Robertson
Minouk J Schoemaker
Sanjay Shete
Anthony J Swerdlow
Joe L Wiemels
John K Wiencke
Ping Yang
Margaret R Wrensch
Institute of Cancer Research · GBUniversity of California, San Francisco · USNeurological Surgery · USThe University of Texas MD Anderson Cancer Center · USKarolinska Institutet · SEMayo Clinic · USUniversity of Leeds · GBInstitute of Human Genetics · PLMayo Clinic in Arizona · USMayo Clinic in Florida · USNational Health Research Institutes · TWUniversity of Nottingham · GB

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Felicity Enders · 1985 to 2026
$151.3M
Tissue CoreP50CA097257 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2002 to 2026
$57.4M
Targeted MV-CEA as a Potent Antitumor Agent against GBMP50CA108961 · NCI · MAYO CLINIC ROCHESTER · PI O'NEILL, BRIAN PATRICK · 2004 to 2015
$22.5M
GENETIC EPIDEMIOLOGY OF MALIGNANT GLIOMAR01CA052689 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WIENCKE, JOHN K., WRENSCH, MARGARET R. · 1991 to 2015
$20.5M
Genetic Epidemiology of Glioma International ConsortiumR01CA119215 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BONDY, MELISSA L. · 2006 to 2010
$11.9M
Training in Molecular& Genetic Epidemiology of CancerR25CA112355 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTE, JOHN S. · 2005 to 2018
$6.5M
MOLECULAR EPIDEMIOLOGY OF GLIOMASR01CA070917 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI BONDY, MELISSA L · 1996 to 2004
$3.0M
Allergic Condition Susceptibility Polymorphisms and Glioma RiskR01CA122163 · NCI · OHIO STATE UNIVERSITY · PI SCHWARTZBAUM, JUDITH · 2008 to 2012
$2.6M
Cancer Research UK C1298/A8362NCI NIH HHS 5R01 CA070917NCI NIH HHS 5R01 CA119215NCI NIH HHS P30 CA015083NCI NIH HHS P30 CA15083NCI NIH HHS P50 CA097257NCI NIH HHS P50CA097257NCI NIH HHS P50 CA108961NCI NIH HHS R01 CA052689NCI NIH HHS R01 CA070917NCI NIH HHS R01 CA119215NCI NIH HHS R01 CA122163NCI NIH HHS R01CA122163NCI NIH HHS R01CA52689NCI NIH HHS R25 CA 112355NCI NIH HHS R25 CA112355Wellcome Trust
6 · The paper itself

Abstract

To determine whether inherited variations in immune function single-nucleotide polymorphisms (SNPs), genes or pathways affect glioblastoma risk, we analyzed data from recent genome-wide association studies in conjunction with predefined immune function genes and pathways. Gene and pathway analyses were conducted on two independent data sets using 6629 SNPs in 911 genes on 17 immune pathways from 525 glioblastoma cases and 602 controls from the University of California, San Francisco (UCSF) and a subset of 6029 SNPs in 893 genes from 531 cases and 1782 controls from MD Anderson (MDA). To further assess consistency of SNP-level associations, we also compared data from the UK (266 cases and 2482 controls) and the Mayo Clinic (114 cases and 111 controls). Although three correlated epidermal growth factor receptor (EGFR) SNPs were consistently associated with glioblastoma in all four data sets (Mantel-Haenzel P values = 1 × 10⁻⁵ to 4 × 10⁻³), independent replication is required as genome-wide significance was not attained. In gene-level analyses, eight immune function genes were significantly (minP < 0.05) associated with glioblastoma; the IL-2RA (CD25) cytokine gene had the smallest minP values in both UCSF (minP = 0.01) and MDA (minP = 0.001) data sets. The IL-2RA receptor is found on the surface of regulatory T cells potentially contributing to immunosuppression characteristic of the glioblastoma microenvironment. In pathway correlation analyses, cytokine signaling and adhesion-extravasation-migration pathways showed similar associations with glioblastoma risk in both MDA and UCSF data sets. Our findings represent the first systematic description of immune genes and pathways that characterize glioblastoma risk.

Indexed as

Polymorphism, Single NucleotideAdultBrain NeoplasmsCytokinesFemaleGenome-Wide Association StudyGlioblastomaHumansMaleSignal TransductionCytokines

Identifiers

PMID20668009
PMCPMC2950934
OpenAlexW2128813013

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.