Evidence map›Paper›PMID 20662764›Full record

ArticleCurrent pharmaceutical biotechnology2010

Defining features and exploring chemical modifications to manipulate RNAa activity.

Robert F Place, Emily J Noonan, Zeno Földes-Papp, Long-Cheng Li

Abstract read
In one paragraph

Article in Current pharmaceutical biotechnology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
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  4. Article
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  6. Oligonucleotide therapies for nonalcoholic steatohepatitis.Molecular therapy. Nucleic acids · 2024
    Review
  7. Molecular therapy. Nucleic acids · 2023
    Article
  8. Review
  9. Review
  10. Article
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  15. Upregulation of FHIT gene expression in endometrial carcinoma by RNA activation.International journal of clinical and experimental pathology · 2020
    Article
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  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Robert F PlaceHelen Diller Comprehensive Cancer Center, Department of Urology, University of California, PO Box 589001, San Francisco, CA 94158-9001, USA. Place.Robert@gmail.com
Emily J Noonan
Zeno Földes-Papp
Long-Cheng Li
UCSF Helen Diller Family Comprehensive Cancer Center · US

Funding

UCSF PROSTATE CANCER SPOREP50CA089520 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CARROLL, PETER R · 2000 to 2008
$13.9M
Transcriptional Activation by Small RNA: Mechanism and Design RulesR01GM090293 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LI, HAO, LI, LONG-CHENG · 2009 to 2013
$2.3M
Small RNA targeted gene activation for the treatment of prostate cancerR21CA131774 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LI, LONG-CHENG · 2008 to 2009
$382k
NCI NIH HHS P50 CA089520NCI NIH HHS P50CA89520NCI NIH HHS R21 CA131774NIGMS NIH HHS 1R01GM090293-0109NIGMS NIH HHS R01 GM090293
6 · The paper itself

Abstract

RNA interference (RNAi) is an evolutionary conserved mechanism by which small double-stranded RNA (dsRNA)--termed small interfering RNA (siRNA)--inhibit translation or degrade complementary mRNA sequences. Identifying features and enzymatic components of the RNAi pathway have led to the design of highly-effective siRNA molecules for laboratory and therapeutic application. RNA activation (RNAa) is a newly discovered mechanism of gene induction also triggered by dsRNAs termed small activating RNA (saRNA). It offers similar benefits as RNA interference (RNAi), while representing a new method of gene overexpression. In the present study, we identify features of RNAa and explore chemical modifications to saRNAs that improve the applicability of RNAa. We evaluate the rate of RNAa activity in order to define an optimal window of gene induction, while comparing the kinetic differences between RNAa and RNAi. We identify Ago2 as a conserved enzymatic component of both RNAa and RNAi implicating that saRNA may tolerate modification based on Ago2 function. As such, we define chemical modifications to saRNAs that manipulate RNAa activity, as well as exploit their effects to design saRNAs with enhanced medicinal properties. These findings reveal functional features of RNAa that may be utilized to augment saRNA function for mechanistic studies or the development of RNAa-based drugs.

Indexed as

Genetic EngineeringRNA, Small InterferingRNA, Small Interfering

Identifiers

PMID20662764
PMCPMC3413318
OpenAlexW2098355234

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.