Evidence map›Paper›PMID 20660490›Full record

ArticleMolecular biology and evolution2011

Expansion of hexose transporter genes was associated with the evolution of aerobic fermentation in yeasts.

Zhenguo Lin, Wen-Hsiung Li

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
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  6. Gene loss, repression, amplification, and horizontal acquisition shape galactose/melibiose metabolism in fission yeast.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Article
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  10. Discovery of additional ancient genome duplications in yeasts.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Article
  13. Chromosome-level Subgenome-awarebioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Zhenguo LinDepartment of Ecology and Evolution, University of Chicago, USA.
Wen-Hsiung Li
University of Chicago · US

Funding

STATISTICAL STUDIES OF DNA EVOLUTIONR37GM030998 · NIGMS · UNIVERSITY OF CHICAGO · PI LI, WEN-HSIUNG · 2000 to 2009
$1.9M
STATISTICAL STUDIES OF DNA EVOLUTIONR01GM030998 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LI, WEN-HSIUNG · 1985 to 1999
–
NIGMS NIH HHS GM30998NIGMS NIH HHS R01 GM030998NIGMS NIH HHS R37 GM030998
6 · The paper itself

Abstract

The genetic basis of organisms' adaptation to different environments is a central issue of molecular evolution. The budding yeast Saccharomyces cerevisiae and its relatives predominantly ferment glucose into ethanol even in the presence of oxygen. This was suggested to be an adaptation to glucose-rich habitats, but the underlying genetic basis of the evolution of aerobic fermentation remains unclear. In S. cerevisiae, the first step of glucose metabolism is transporting glucose across the plasma membrane, which is carried out by hexose transporter proteins. Although several studies have recognized that the rate of glucose uptake can affect how glucose is metabolized, the role of HXT genes in the evolution of aerobic fermentation has not been fully explored. In this study, we identified all members of the HXT gene family in 23 fully sequenced fungal genomes, reconstructed their evolutionary history to pinpoint gene gain and loss events, and evaluated their adaptive significance in the evolution of aerobic fermentation. We found that the HXT genes have been extensively amplified in the two fungal lineages that have independently evolved aerobic fermentation. In contrast, reduction of the number of HXT genes has occurred in aerobic respiratory species. Our study reveals a strong positive correlation between the copy number of HXT genes and the strength of aerobic fermentation, suggesting that HXT gene expansion has facilitated the evolution of aerobic fermentation.

Indexed as

Evolution, MolecularAdaptation, BiologicalFermentationGene AmplificationGene DosageGene DuplicationGene Expression Regulation, FungalGlucoseMonosaccharide Transport ProteinsMultigene FamilyPhylogenySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsGlucoseMonosaccharide Transport ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID20660490
PMCPMC3002240
OpenAlexW2109537731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.