Evidence map›Paper›PMID 20659471›Full record

ArticleGastroenterology2010

Genetic heterogeneity in colorectal cancer associations between African and European americans.

Sonia S Kupfer, Jeffrey R Anderson, Stanley Hooker, Andrew Skol, Rick A Kittles, Temitope O Keku, Robert S Sandler, Nathan A Ellis

Open access · bronzeAbstract readComparative StudyMulticenter Study
In one paragraph

Article in Gastroenterology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 16 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 16 pooled it
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 16 syntheses or guidelines pooled it, 69 citations in OpenAlex.

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  9. Common variation rs6983267 at 8q24.1 and risk of colorectal adenoma and cancer: evidence based on 31 studies.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
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  17. Emerging trends in the global burden of colorectal cancer.Nature reviews. Clinical oncology · 2026
    Review
  18. Black-White disparities across the colorectal cancer care continuum in the USA.Nature reviews. Gastroenterology & hepatology · 2025
    Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sonia S KupferDepartment of Medicine, Section of Gastroenterology, University of Chicago Medical Center, Chicago, Illinois 60637, USA.
Jeffrey R Anderson
Stanley Hooker
Andrew Skol
Rick A Kittles
Temitope O Keku
Robert S Sandler
Nathan A Ellis
University of Chicago Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT S. SANDLER · 1985 to 2026
$30.5M
ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
Population Study of Rectal Cancer in Blacks and WhitesR01CA066635 · NCI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SANDLER, ROBERT S · 1996 to 2005
$4.2M
Genetic risk factors in African American colorectal cancer patientsU01CA153060 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ELLIS, NATHAN A. · 2010 to 2014
$1.7M
Genetic Association Studies in African American Colorectal Cancer PatientsK08CA142892 · NCI · UNIVERSITY OF CHICAGO · PI KUPFER, SONIA · 2010 to 2014
$822k
NCI NIH HHS K08 CA142892NCI NIH HHS R01 CA066635NCI NIH HHS R01 CA66635NCI NIH HHS U01 CA153060NIDDK NIH HHS P30 DK034987NIDDK NIH HHS P30 DK042086NIDDK NIH HHS P30 DK34987NIDDK NIH HHS P30 DK42086NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

BACKGROUND &

aimsGenome-wide association studies of colorectal cancer (CRC) have identified risk variants in 10 genomic regions. None of these studies included African Americans, who have the highest incidence and mortality from CRC in the United States. For the 10 genomic regions, we performed an association study of Americans of African and European descent.

methodsWe genotyped 22 single nucleotide polymorphisms (SNPs) in DNA samples from 1194 patients with CRC (795 African Americans and 399 European Americans) and 1352 controls (985 African Americans and 367 European Americans). At chromosome 8q24.21 region 3, we analyzed 6 SNPs from 1000 African American cases and 1393 controls. Association testing was done using multivariate logistic regression controlling for ancestry, age, and sex.

resultsAmong African Americans, the SNP rs6983267 at 8q24.21 was not associated with CRC (odds ratio, 1.18; P = .12); instead, the 8q24.21 SNP rs7014346 (odds ratio, 1.15; P = .03) was associated with CRC in this population. At 15q13.3, rs10318 was associated with CRC in both populations. At 11q23.1, rs3802842 was significantly associated with rectal cancer risk only among African Americans (odds ratio, 1.34; P = .01); this observation was made in previous studies. Among European Americans, SNPs at 8q24.21, 11q23.1, and 16q22.1 were significantly associated with CRC, and the odds ratios were of the same magnitude and direction for all SNPs tested, consistent with previously published studies. In contrast, in African Americans, the opposite allele of rs10795668 at 10p14 was associated with colorectal cancer (odds ratio, 1.35; P = .04), and altogether the odds ratios were in the opposite direction for 9 of the 22 SNPs tested.

conclusionsThere is genetic heterogeneity in CRC associations in Americans of African versus European descent.

Indexed as

Black or African AmericanPolymorphism, GeneticAgedColorectal NeoplasmsConfidence IntervalsDNA, NeoplasmEuropeFemaleGenome-Wide Association StudyGenotypeHumansIncidenceMaleMiddle AgedOdds RatioRetrospective StudiesDNA, Neoplasm

Identifiers

PMID20659471
PMCPMC3721963
OpenAlexW2165918430

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.